PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_026221-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Dof | ||||||||
Protein Properties | Length: 292aa MW: 32372 Da PI: 6.1236 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 119.1 | 1.7e-37 | 23 | 79 | 6 | 62 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +cprC s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk ++++ NNU_026221-RA 23 PNCPRCASVNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKTRRVK 79 68***************************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-28 | 11 | 77 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 7.1E-32 | 23 | 77 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.444 | 23 | 77 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 25 | 61 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MFPYSSRSSA MDHRWKPTVE VAPNCPRCAS VNTKFCYYNN YSLSQPRYFC KGCRRYWTKG 60 GSLRNVPVGG GCRKTRRVKS SKLPPTKAVS ISLGFSGDGP SSVANPTVVP TTAVTDASNI 120 DLAVVLAKFL NQNSSLGSGL ITPEFSSEKE VNASLNISTS SNSNELAEDS NVVDWQSQTD 180 LAIDAHLIKE PPQLFPGQLE FDCKQQQERI SQFAVQKSNS NSGFQPLVSD GTAQDAFWWE 240 APAVPNLAWQ PEEFQSLETI PFNDHITMFY PHSPNDNWSS FDTLNYESFS RP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010247650.1 | 0.0 | PREDICTED: dof zinc finger protein DOF1.2 | ||||
TrEMBL | A0A1U7Z5Q1 | 0.0 | A0A1U7Z5Q1_NELNU; dof zinc finger protein DOF1.2 | ||||
STRING | XP_010247650.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 1e-39 | Dof family protein |