PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_026136-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 448aa    MW: 49674.6 Da    PI: 6.8059
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_026136-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11e-09162204345
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                    + k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  NNU_026136-RA 162 DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 204
                    66889*************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-7154207No hitNo description
SMARTSM003381.4E-8160223IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.438162206IPR004827Basic-leucine zipper domain
PfamPF001701.0E-6163204IPR004827Basic-leucine zipper domain
CDDcd147086.70E-22164216No hitNo description
SuperFamilySSF579597.5E-7164207No hitNo description
PROSITE patternPS000360167182IPR004827Basic-leucine zipper domain
PfamPF141443.0E-33246321IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MDGSHVHNSR VSDLGPLEQS VGYRIEDAVD LSRNSNFFSP SDTYLVEDPI FNPTKSSAQV  60
VASDPLQFGT FNKLVPSSEI NPSPARVGTQ RLPTQKGQPN LVSISSGHFE NWGESTMADA  120
SPRTDTSTDV DTDDKNPRME MGQSTTAVVA SDSSDRSKDK ADQKTLRRLA QNREAARKSR  180
LRKKAYVQQL ENSRLKLTQL EQELQRARQQ GIFISSSGDQ SHSMSGNGAL AFDIEYARWL  240
EEHNRQINEL RNAVNSHASD SELRIIVDGV MAHYDDIFRL KGTAAKADVF HILSGMWKTP  300
AERCFLWIGG FRSSELLKLL VNQLEPLTEQ QLVGICNLQQ SSQQAEDALS QGMEALQQSL  360
AETLASGSLG PSGSGNVANY MGQMAMAMGK LGTLEGFLRQ ADNLRQQTLQ QMHRILTTRQ  420
SARALLAIND YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010247478.20.0PREDICTED: transcription factor TGA2.2-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1U7Z5A50.0A0A1U7Z5A5_NELNU; transcription factor TGA2.2-like isoform X1
STRINGXP_010247478.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-143bZIP family protein