PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_025883-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Nin-like | ||||||||
Protein Properties | Length: 149aa MW: 16996.7 Da PI: 9.9179 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85.6 | 4.4e-27 | 93 | 142 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i l+d+ kyF+lpi++A+++L+v++TvLKr+CR++GI+RWPhRkiksl NNU_025883-RA 93 ARIALSDIVKYFNLPIAEASRNLKVGVTVLKRKCRELGIPRWPHRKIKSL 142 6899********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 18.678 | 78 | 149 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 8.0E-22 | 95 | 142 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
NSKLTSISTL ANDLQEIFQL KHQSENQEPS PFAPKKMCEE KKDNNQSTRP MFNQDLNCLP 60 LPVVSPELTE NQQLNQAVPE VLKKKRATTE DIARIALSDI VKYFNLPIAE ASRNLKVGVT 120 VLKRKCRELG IPRWPHRKIK SLDTLIHSL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010247096.2 | 1e-104 | PREDICTED: LOW QUALITY PROTEIN: protein RKD5, partial | ||||
Swissprot | O81791 | 7e-32 | RKD5_ARATH; Protein RKD5 | ||||
TrEMBL | A0A1U7Z7Z9 | 1e-102 | A0A1U7Z7Z9_NELNU; LOW QUALITY PROTEIN: protein RKD5 | ||||
STRING | XP_010247096.1 | 1e-103 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 3e-34 | RWP-RK domain-containing protein |
Publications ? help Back to Top | |||
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