PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_025861-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 221aa MW: 24703.9 Da PI: 4.554 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.3 | 2.7e-18 | 5 | 68 | 55 | 128 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e+ wyfFs++d + at gyWkatg d+++ls +++++ +k++L fy+g+ap+g+kt+W+mh+y++ NNU_025861-RA 5 EHVWYFFSSEDPA---------ATGIGYWKATGVDHRILS-NSHTTACKTILEFYTGQAPNGNKTNWMMHQYKI 68 5678999988775.........5889**************.999****************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 24.692 | 1 | 88 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.75E-22 | 4 | 87 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-9 | 8 | 68 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MLGAEHVWYF FSSEDPAATG IGYWKATGVD HRILSNSHTT ACKTILEFYT GQAPNGNKTN 60 WMMHQYKINQ KGNNNAQDST SLCRVFLNSG HNPKHEVQQS QASLNDSSGD NTYSMLSSML 120 NMEQNNYDGQ NPAIVNSSQV TGRVDENGLL AVSERHFPEH RPNNPIQEPH EIYDFSRGDF 180 LELQDLVDPE SPSSSSENSS FLTMSSDEYF DSLALLQGGW I |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-16 | 2 | 86 | 67 | 163 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-16 | 2 | 86 | 67 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-16 | 2 | 86 | 67 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-16 | 2 | 86 | 67 | 163 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
3swm_B | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
3swm_C | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
3swm_D | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
3swp_A | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
3swp_B | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
3swp_C | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
3swp_D | 1e-16 | 2 | 86 | 70 | 166 | NAC domain-containing protein 19 |
4dul_A | 1e-16 | 2 | 86 | 67 | 163 | NAC domain-containing protein 19 |
4dul_B | 1e-16 | 2 | 86 | 67 | 163 | NAC domain-containing protein 19 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019052000.1 | 1e-163 | PREDICTED: protein SOMBRERO-like isoform X1 | ||||
Refseq | XP_019052001.1 | 1e-163 | PREDICTED: protein SOMBRERO-like isoform X1 | ||||
Refseq | XP_019052002.1 | 1e-163 | PREDICTED: protein SOMBRERO-like isoform X1 | ||||
Refseq | XP_019052003.1 | 1e-163 | PREDICTED: protein SOMBRERO-like isoform X1 | ||||
TrEMBL | A0A1U8PZN6 | 1e-162 | A0A1U8PZN6_NELNU; protein SOMBRERO-like isoform X1 | ||||
STRING | XP_010246998.1 | 1e-163 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 2e-20 | NAC domain containing protein 57 |