PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_023668-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 300aa MW: 34057.7 Da PI: 6.1675 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.3 | 5.1e-52 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + NNU_023668-RA 7 LPPGFRFHPTDEELVMHYLCRKCASQSIAV-PIIAEIDLYKYDPWHLPCMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQ-- 99 79*************************999.88***************65556899************************************98.. PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g+kk Lvfy g+ap+gekt+W+mheyrl NNU_023668-RA 100 PKPIGIKKALVFYAGKAPRGEKTNWIMHEYRL 131 789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-61 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.675 | 7 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-27 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence Send to blast |
MTADLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW HLPCMALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGQP KPIGIKKALV FYAGKAPRGE 120 KTNWIMHEYR LADVDRSARK KNSLRLDDWV LCRIYNKKGS IERNMSVDSR KSMPVPSSTC 180 SDVEDQKPDT VSYGCDMLAL PPAAAPPIND MMYFDSSDSI PKLHADSSCS EHVVSPDFTC 240 DKEVESEPKW SDCEKALDFP YNYLDATGGT AADNPFPLLN HNVNEFNPLQ DMFMYLQKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-81 | 3 | 163 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010243512.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-140 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A1U7YT81 | 0.0 | A0A1U7YT81_NELNU; NAC domain-containing protein 2-like | ||||
STRING | XP_010243512.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-141 | NAC family protein |