PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_023611-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | bHLH | ||||||||
Protein Properties | Length: 507aa MW: 56915.6 Da PI: 5.6499 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.2 | 3.4e-14 | 304 | 350 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + h + Er+RR+++N++f Lr l+P++ +K + a+i+ A++YIk+L NNU_023611-RA 304 AHHFATERQRREQLNEKFKALRLLVPNP-----TKADRASIVGDAIDYIKEL 350 579*************************.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.66E-16 | 299 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.685 | 301 | 350 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.5E-11 | 304 | 350 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.5E-14 | 305 | 358 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 9.98E-13 | 305 | 354 | No hit | No description |
SMART | SM00353 | 1.1E-13 | 307 | 356 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0048658 | Biological Process | anther wall tapetum development | ||||
GO:0052543 | Biological Process | callose deposition in cell wall | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence Send to blast |
MYVETQYFDP HDPHQIPAAV SVDNPSQTVT DCSGLSPLMN SFQDNLRFSS SSSPEDIPDH 60 PNPSGDTSAS AIAASMGIDL QQQLGFEMEH ELNNHLMQDV LHDPAQTQFE QHNWNVGEQD 120 MSYRHEQPLP QQYQQYHDQD QHVGLQHNLH CLNSTPFQNP PYVATPDLLN LLQLPRCTVS 180 SMLPASSISF TNTSKKRPNY QTSLDIFGEL PTTDGTVAAT SLYDHPPLHL NLPPQPPLFR 240 ELFHLPQNYN LPGSRGGSFF GGLDEREVSC GVYQDGDDRQ FENSVLDFRR EMNGLGKGGE 300 ARGAHHFATE RQRREQLNEK FKALRLLVPN PTKADRASIV GDAIDYIKEL LRTVDELKIL 360 VEKKRCGRGG SKKLKTDDEA AGDMEGSSMK KHGTLTDREQ SFNGSLRSSW LQRKSKDTEV 420 DVRIIDDEVT IKLIQRKKVN CLLVVSKILD ELQLDLLHVA GGNIGDYYSF LFNTKIYEGS 480 SVYASAIAKK LIEVVDRQHA AFPPSNF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010243136.1 | 0.0 | PREDICTED: transcription factor EAT1-like | ||||
Refseq | XP_010243137.1 | 0.0 | PREDICTED: transcription factor EAT1-like | ||||
Refseq | XP_010243138.1 | 0.0 | PREDICTED: transcription factor EAT1-like | ||||
TrEMBL | A0A1U7YSD7 | 0.0 | A0A1U7YSD7_NELNU; transcription factor EAT1-like | ||||
STRING | XP_010243136.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 2e-83 | bHLH family protein |