PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_023364-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

NAC

Protein Properties

Length: 310aa MW: 36068.2 Da PI: 8.9157

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_023364-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.1	6.3e-48	22	148	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 pGfrFhPt+eel+++yLkk v gkk+++ ++i ++iy+++PwdLp +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s NNU_023364-RA 22 PGFRFHPTEEELLDFYLKKTVFGKKIHF-DIIGFLNIYHHDPWDLPGLAKIGEREWYFFVPRDRKHGNGGRPNRTTEHGFWKATGSDRPIRSLsnP 116 9************************9.99***********8888899*********************************987556 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +gl+ktLvfykgrap+g+ktdWvm+eyr+ NNU_023364-RA 117 KRIIGLRKTLVFYKGRAPRGSKTDWVMNEYRM 148 777*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.75E-56	20	169	IPR003441	NAC domain
PROSITE profile	PS51005	54.867	20	169	IPR003441	NAC domain
Pfam	PF02365	1.2E-24	22	148	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
MSQDHPPKTT STTTKSPDFG LPGFRFHPTE EELLDFYLKK TVFGKKIHFD IIGFLNIYHH 60 DPWDLPGLAK IGEREWYFFV PRDRKHGNGG RPNRTTEHGF WKATGSDRPI RSLSNPKRII 120 GLRKTLVFYK GRAPRGSKTD WVMNEYRMPE TCTLPKMQED IVLCKVYRKA TSLKVLEQRA 180 AMEEDTKTII VASSPSSSPA MDNELSSYEP QEDLMAITKP TQMPPKPMQS GIVFKTEEKE 240 KEEEEEEKKE DGKDNKDAWF LARDGLKLKK KLPELQLPKL TMDWTQDPFW TQLRSPWLDN 300 WTPYANILNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-47	22	169	17	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010242846.1	0.0	PREDICTED: NAC transcription factor 29-like
Swissprot	Q10S65	1e-103	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A1U7Z797	0.0	A0A1U7Z797_NELNU; NAC transcription factor 29-like
STRING	XP_010242846.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	6e-98	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]