PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_023151-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family Nin-like
Protein Properties Length: 981aa    MW: 106885 Da    PI: 5.8781
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_023151-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK94.29.1e-30604655152
         RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                    aek+isl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++
  NNU_023151-RA 604 AEKNISLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 655
                    589***********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.132587675IPR003035RWP-RK domain
PfamPF020422.7E-26607655IPR003035RWP-RK domain
SMARTSM006661.6E-23881963IPR000270PB1 domain
SuperFamilySSF542772.16E-21881963No hitNo description
PROSITE profilePS5174523.664881963IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2408.9E-23881960No hitNo description
CDDcd064071.49E-30882962No hitNo description
PfamPF005641.2E-18882962IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 981 aa     Download sequence    Send to blast
MEYPFQPREN GVNYWTSSSA HMEGFPSVEG GTRNPISEDS FNGLSEFINS DTYVDFCTSL  60
SSADLVLPSN GLSSVPPIPS NFASAIPYNY SAQISGVLPV NNGDPLGTVG SSSSCADKTV  120
FQQMGTQIGF SLSSSDADDL DGKQNNGYFP QPSISGSGNH IISRSIGWLP AEQMLKALSL  180
FKESSGGGIL AQFWVPIKHG NDFVLSTCDQ PYLLDKILSG YRDASRAFTF SPREVPGSFL  240
GLPGRVFISK MPEWTSNVVY YNKTEYLRLK HAIDHQVRGS LALPVFSPHH RSCFAVLELV  300
TVKEKPNFDE EMETACRALE AVNLRTTAPP RVHSQSLSKS QRAALAEIAD ILKAVCHAHS  360
LPLALTWIPC SYIDGVSDEF TRECIVEGNA SPSEKCILCI EDTACYVNDA KMQGFVHACT  420
EHHLEKGQGI AGKALQSNHP FFSPDVKVYS INEYPLVHHA RKFDLNSAVA IRLRSTFTGD  480
DDYILEFFLP VNCKRSSEQQ LLLNNLSSTM QRLCRSLRTV SDAELVRSED SKLGHEKGAQ  540
ENSMPTVMSL KGSQPALLDG DLDSNEMVAS HVFNPRTDGQ NADASNNQAS NDPRKQVEKK  600
RNTAEKNISL SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR  660
KIQTVIDSVQ GVQGGLKFDP ITGEFVAAAP IVQDLEARTN MFSANKNLAA RNPDPASQGV  720
ASAIPILHTE GEGTTVKLEE DDCSGTTQGV PVGNMLLPNT FEGEREKSNN PSVGFSHDSK  780
FATLDSGLLQ PVRCNRWDPH KGGLSLESSD CHITSRSSSS MAVNDDMDTG IDGDAQPSSS  840
GMTDSSNGSG SMMNGSASSS PRFLEQKSSR VKACNKDSGL IITIKATYKD DTVRFKFGPG  900
MGCFQLMDEI AKRFKLQPGT FQLKYLDDEA EWVLLMSDSD LQECLEILES IGSRSVKLMV  960
RDLPLATGSS DSSNCLFIGS L
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242719.10.0PREDICTED: protein NLP9-like
TrEMBLA0A1U7YU450.0A0A1U7YU45_NELNU; protein NLP9-like
STRINGXP_010242719.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.20.0Nin-like family protein