PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_023151-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Nin-like | ||||||||
Protein Properties | Length: 981aa MW: 106885 Da PI: 5.8781 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 94.2 | 9.1e-30 | 604 | 655 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ NNU_023151-RA 604 AEKNISLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 655 589***********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.132 | 587 | 675 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.7E-26 | 607 | 655 | IPR003035 | RWP-RK domain |
SMART | SM00666 | 1.6E-23 | 881 | 963 | IPR000270 | PB1 domain |
SuperFamily | SSF54277 | 2.16E-21 | 881 | 963 | No hit | No description |
PROSITE profile | PS51745 | 23.664 | 881 | 963 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 8.9E-23 | 881 | 960 | No hit | No description |
CDD | cd06407 | 1.49E-30 | 882 | 962 | No hit | No description |
Pfam | PF00564 | 1.2E-18 | 882 | 962 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 981 aa Download sequence Send to blast |
MEYPFQPREN GVNYWTSSSA HMEGFPSVEG GTRNPISEDS FNGLSEFINS DTYVDFCTSL 60 SSADLVLPSN GLSSVPPIPS NFASAIPYNY SAQISGVLPV NNGDPLGTVG SSSSCADKTV 120 FQQMGTQIGF SLSSSDADDL DGKQNNGYFP QPSISGSGNH IISRSIGWLP AEQMLKALSL 180 FKESSGGGIL AQFWVPIKHG NDFVLSTCDQ PYLLDKILSG YRDASRAFTF SPREVPGSFL 240 GLPGRVFISK MPEWTSNVVY YNKTEYLRLK HAIDHQVRGS LALPVFSPHH RSCFAVLELV 300 TVKEKPNFDE EMETACRALE AVNLRTTAPP RVHSQSLSKS QRAALAEIAD ILKAVCHAHS 360 LPLALTWIPC SYIDGVSDEF TRECIVEGNA SPSEKCILCI EDTACYVNDA KMQGFVHACT 420 EHHLEKGQGI AGKALQSNHP FFSPDVKVYS INEYPLVHHA RKFDLNSAVA IRLRSTFTGD 480 DDYILEFFLP VNCKRSSEQQ LLLNNLSSTM QRLCRSLRTV SDAELVRSED SKLGHEKGAQ 540 ENSMPTVMSL KGSQPALLDG DLDSNEMVAS HVFNPRTDGQ NADASNNQAS NDPRKQVEKK 600 RNTAEKNISL SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR 660 KIQTVIDSVQ GVQGGLKFDP ITGEFVAAAP IVQDLEARTN MFSANKNLAA RNPDPASQGV 720 ASAIPILHTE GEGTTVKLEE DDCSGTTQGV PVGNMLLPNT FEGEREKSNN PSVGFSHDSK 780 FATLDSGLLQ PVRCNRWDPH KGGLSLESSD CHITSRSSSS MAVNDDMDTG IDGDAQPSSS 840 GMTDSSNGSG SMMNGSASSS PRFLEQKSSR VKACNKDSGL IITIKATYKD DTVRFKFGPG 900 MGCFQLMDEI AKRFKLQPGT FQLKYLDDEA EWVLLMSDSD LQECLEILES IGSRSVKLMV 960 RDLPLATGSS DSSNCLFIGS L |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010242719.1 | 0.0 | PREDICTED: protein NLP9-like | ||||
TrEMBL | A0A1U7YU45 | 0.0 | A0A1U7YU45_NELNU; protein NLP9-like | ||||
STRING | XP_010242719.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.2 | 0.0 | Nin-like family protein |