PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_023112-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 114aa MW: 12806.8 Da PI: 7.056 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.6 | 1.1e-10 | 16 | 43 | 1 | 28 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkl 28 lppGfrFhPtdeel+++yL kk+ +kl NNU_023112-RA 16 LPPGFRFHPTDEELITHYLSKKAILSKL 43 79*******************9866664 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-10 | 12 | 45 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.7E-8 | 17 | 52 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
MENVSGLNME EEQIDLPPGF RFHPTDEELI THYLSKKAIL SKLRVGCQIG GEIPNPQNVC 60 LFPTMTSTKE RRGGDTINHP SSLRSLSFQI ERGSFPLLKL YMLVGSTLHI PMSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 2e-15 | NAC domain containing protein 100 |