PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022570-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 497aa    MW: 57222.7 Da    PI: 6.5054
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022570-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.84.5e-49341612128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    ppGfrFhPtdeel+ +yLk+k+ ++++   + i+e+d+yk++P+dLp + ++k+++++wyfFs+rdkky +g r+nrat +gyWk tgk ++++  
  NNU_022570-RA  34 PPGFRFHPTDEELLLYYLKRKLCRRRCLNLNLIAETDLYKWDPEDLPgQsMLKSRDRQWYFFSRRDKKYLNGPRSNRATVNGYWKVTGKVRNIIW- 128
                    8*************************777799**************96347788999**************************************. PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++++vg+kk+Lvf+kgrap+g++tdWvmhey++
  NNU_022570-RA 129 NSRTVGMKKILVFHKGRAPTGQRTDWVMHEYTM 161
                    999****************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-5329185IPR003441NAC domain
PROSITE profilePS5100554.05733185IPR003441NAC domain
PfamPF023659.6E-2634160IPR003441NAC domain
PfamPF139664.6E-19325410IPR026960Reverse transcriptase zinc-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    Send to blast
MDAAVSESPP CVADDNHGGC HGDRRRWPAR SSWPPGFRFH PTDEELLLYY LKRKLCRRRC  60
LNLNLIAETD LYKWDPEDLP GQSMLKSRDR QWYFFSRRDK KYLNGPRSNR ATVNGYWKVT  120
GKVRNIIWNS RTVGMKKILV FHKGRAPTGQ RTDWVMHEYT MDDEELRKCQ AYSEESYAIC  180
KIYKKSGRGP KVCEQYGAPF MEEEWDDDDD DEDDDSNNPV DENPTNREGV GCQLNEIPSV  240
NSPPVYNQCQ DENFSQLSYE AEETEPGQAN GIAQEPTQIC CHFNVSNLIC SAKGTSAPSP  300
FYLAQNANPH GLDLREWKWH SFGVFSVTSL YKSLVKGGTS DFPHKEIWST VAPSKVKFFI  360
WLVVLDKCLT KINMLKMGIA VDNSLCLLRE KEQELACHLF IHCDYTTRVW SHFMKAIQQS  420
GYRPSSVIDL FEGLACEGYD DVGKAIWAVV PAAVIWATWF ERNGWIFEQR KNPAEDKIKL  480
SFGLTKDRLL VMEQPRV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-413418616169Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241796.10.0PREDICTED: NAC domain-containing protein 26-like
TrEMBLA0A1U7YS020.0A0A1U7YS02_NELNU; NAC domain-containing protein 26-like
STRINGXP_010241796.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.12e-59NAC domain containing protein 17