PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_022570-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 497aa MW: 57222.7 Da PI: 6.5054 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.8 | 4.5e-49 | 34 | 161 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppGfrFhPtdeel+ +yLk+k+ ++++ + i+e+d+yk++P+dLp + ++k+++++wyfFs+rdkky +g r+nrat +gyWk tgk ++++ NNU_022570-RA 34 PPGFRFHPTDEELLLYYLKRKLCRRRCLNLNLIAETDLYKWDPEDLPgQsMLKSRDRQWYFFSRRDKKYLNGPRSNRATVNGYWKVTGKVRNIIW- 128 8*************************777799**************96347788999**************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk+Lvf+kgrap+g++tdWvmhey++ NNU_022570-RA 129 NSRTVGMKKILVFHKGRAPTGQRTDWVMHEYTM 161 999****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-53 | 29 | 185 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.057 | 33 | 185 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.6E-26 | 34 | 160 | IPR003441 | NAC domain |
Pfam | PF13966 | 4.6E-19 | 325 | 410 | IPR026960 | Reverse transcriptase zinc-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 497 aa Download sequence Send to blast |
MDAAVSESPP CVADDNHGGC HGDRRRWPAR SSWPPGFRFH PTDEELLLYY LKRKLCRRRC 60 LNLNLIAETD LYKWDPEDLP GQSMLKSRDR QWYFFSRRDK KYLNGPRSNR ATVNGYWKVT 120 GKVRNIIWNS RTVGMKKILV FHKGRAPTGQ RTDWVMHEYT MDDEELRKCQ AYSEESYAIC 180 KIYKKSGRGP KVCEQYGAPF MEEEWDDDDD DEDDDSNNPV DENPTNREGV GCQLNEIPSV 240 NSPPVYNQCQ DENFSQLSYE AEETEPGQAN GIAQEPTQIC CHFNVSNLIC SAKGTSAPSP 300 FYLAQNANPH GLDLREWKWH SFGVFSVTSL YKSLVKGGTS DFPHKEIWST VAPSKVKFFI 360 WLVVLDKCLT KINMLKMGIA VDNSLCLLRE KEQELACHLF IHCDYTTRVW SHFMKAIQQS 420 GYRPSSVIDL FEGLACEGYD DVGKAIWAVV PAAVIWATWF ERNGWIFEQR KNPAEDKIKL 480 SFGLTKDRLL VMEQPRV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-41 | 34 | 186 | 16 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010241796.1 | 0.0 | PREDICTED: NAC domain-containing protein 26-like | ||||
TrEMBL | A0A1U7YS02 | 0.0 | A0A1U7YS02_NELNU; NAC domain-containing protein 26-like | ||||
STRING | XP_010241796.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 2e-59 | NAC domain containing protein 17 |