PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_022541-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Trihelix | ||||||||
Protein Properties | Length: 88aa MW: 9131.05 Da PI: 4.5054 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 38.6 | 2.8e-12 | 53 | 88 | 1 | 36 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+laL+++r+em+ ++r++ lk+plWeevs+ NNU_022541-RA 53 RWPRQETLALLKIRSEMGVAFRDSTLKGPLWEEVSR 88 8*********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence Send to blast |
MLGVSGLLGN SGGGATDGSH EDEVGVAGAI AGGFGEEDKG KAEEGERNSA GSRWPRQETL 60 ALLKIRSEMG VAFRDSTLKG PLWEEVSR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010241710.1 | 1e-53 | PREDICTED: trihelix transcription factor GT-2-like | ||||
TrEMBL | A0A1U7YV28 | 2e-52 | A0A1U7YV28_NELNU; trihelix transcription factor GT-2-like | ||||
STRING | XP_010241710.1 | 4e-53 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 6e-19 | Trihelix family protein |