PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_020668-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NZZ/SPL | ||||||||
Protein Properties | Length: 214aa MW: 22825.6 Da PI: 8.7299 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 21.2 | 4.8e-07 | 16 | 59 | 42 | 84 |
NOZZLE 42 srgrkpgsk.taqqkqkkptlrgmgvaklerfiieeekkklvva 84 s g gs+ t + kqkk rg+gva+le+ ++ee++kk +++ NNU_020668-RA 16 SGGGGSGSRsTKKLKQKKIPQRGLGVAQLEKIRLEEQQKKDAAS 59 556677887255679*********************99987543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08744 | 4.5E-5 | 16 | 62 | IPR014855 | Plant transcription factor NOZZLE |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MVQEEQYQRW CSNSSSGGGG SGSRSTKKLK QKKIPQRGLG VAQLEKIRLE EQQKKDAASV 60 AVVPSSPCIV IPLPPHNPYH SQSSVPFPPP PVDLSSSSSL FRPVAPSIPI STHDLFVLPP 120 PNPTPPPLHG LPSSPLGAEG GVFSALGDSA VTGAGDAYLQ SIWNSHELSE GSKLDPGFTF 180 RSRLQNDNTI WLPPVITHSK QPQQQHSSSS MASN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010277720.1 | 1e-149 | PREDICTED: uncharacterized protein LOC104612101 | ||||
TrEMBL | A0A1U8BKH6 | 1e-147 | A0A1U8BKH6_NELNU; uncharacterized protein LOC104612101 | ||||
STRING | XP_010277720.1 | 1e-148 | (Nelumbo nucifera) |