PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_019386-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 462aa    MW: 52936.2 Da    PI: 6.1066
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_019386-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.34.7e-47311572128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    ppGfrF P+deelvv+yL+k + +++l++ + i+ v +y++ P+ L +  k + ++kewyfF++rd+ky++g+r+nr++ +gyWkatg dk+++s 
  NNU_019386-RA  31 PPGFRFTPSDEELVVFYLQKMLLEERLPA-NKIEVVSLYDYSPQALTEkhKPYVRQKEWYFFTHRDRKYRNGSRPNRSAGDGYWKATGADKSIYS- 124
                    9****************************.77**************84235556899**************************************. PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +g +vg kk Lvfykg+ pkgekt+W+mheyr+
  NNU_019386-RA 125 NGVHVGYKKALVFYKGKPPKGEKTNWIMHEYRI 157
                    999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-5327205IPR003441NAC domain
PROSITE profilePS5100550.85230205IPR003441NAC domain
PfamPF023651.3E-2431157IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MEDVSSSSPT SVKSPSKTSD SRGDVDFSDI PPGFRFTPSD EELVVFYLQK MLLEERLPAN  60
KIEVVSLYDY SPQALTEKHK PYVRQKEWYF FTHRDRKYRN GSRPNRSAGD GYWKATGADK  120
SIYSNGVHVG YKKALVFYKG KPPKGEKTNW IMHEYRIAEY INPRPKEKRH DMRVWFFIIL  180
FISFNQLFIS VCFLDDFVLC KIYKKPEKSA TTRVAGDPEK AKVDGEAREI SNNYCDLDIP  240
YTQSSFYDEY ISMHKEDAEQ NFYTNEGIPD QPLQHSNLEY RQNFPNNDQR FTNMGLLHGS  300
AELDLDYWNS NSNLHTNGAD SPWKSVQGSC NDLFRQLSDF MHDTLSPFIA EASFVQPELK  360
TDQGDDSTVP PMPPLRRRRI DASPSPLNYN FVDVPLLPLQ PSNQNFVGDP LVELLSENHV  420
GVPPLPPVLQ PSQADAPPLP PPNQNNGGVP PEPQQQFHGR RR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A4e-453020520168NAC domain-containing protein 19
3swm_B4e-453020520168NAC domain-containing protein 19
3swm_C4e-453020520168NAC domain-containing protein 19
3swm_D4e-453020520168NAC domain-containing protein 19
3swp_A4e-453020520168NAC domain-containing protein 19
3swp_B4e-453020520168NAC domain-containing protein 19
3swp_C4e-453020520168NAC domain-containing protein 19
3swp_D4e-453020520168NAC domain-containing protein 19
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275850.10.0PREDICTED: NAC domain-containing protein 26-like
TrEMBLA0A1U8BG550.0A0A1U8BG55_NELNU; NAC domain-containing protein 26-like
STRINGXP_010275850.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.21e-48NAC domain containing protein 47