PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_017396-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 104aa    MW: 11681.2 Da    PI: 9.8844
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_017396-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.71.5e-12129155128
            NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.....kg.rapkgektdWvmheyrl 128
                    ++ ++fF++ ++k  +g  +   + +  Wka+  d  v++ +g++vgl k+Lv+y      g + ++++kt W+++e++l
  NNU_017396-RA  12 NEALHFFVSLKRKCVNGCGPDHRAGDELWKASSGDSYVKDDRGKVVGLTKSLVYYqyrkeGGrSCKDASKTYWIINEFSL 91 
                    3467*************999998999*****************************44432121345566*********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.0141104IPR003441NAC domain
SuperFamilySSF1019411.18E-121396IPR003441NAC domain
PfamPF023651.3E-41691IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MAGVNQEGKK CNEALHFFVS LKRKCVNGCG PDHRAGDELW KASSGDSYVK DDRGKVVGLT  60
KSLVYYQYRK EGGRSCKDAS KTYWIINEFS LSNRPRQAKQ SVTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.16e-10NAC domain containing protein 36