PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_016567-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 600aa MW: 66071 Da PI: 7.0173

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_016567-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.5	1e-11	424	482	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK ++i eLe kv++L++e ++L +l l+ +a l+s++ NNU_016567-RA 424 KRAKRILANRQSAARSKERKMKYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSQN 482 9****************************************************999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-18	420	484	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.955	422	485	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.53E-11	424	475	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.6E-10	424	481	No hit	No description
Pfam	PF00170	2.5E-10	424	482	IPR004827	Basic-leucine zipper domain
CDD	cd14703	4.51E-23	425	476	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence Send to blast
MEDTEEARND MMQRLQSSFG TSSSSIPKQH SSTSRPDVPQ LNASQIRAPI RPFFQNFSPD 60 NNKRPGIPPS HPHIPPASPY SQIPVSRPNA QALGSQSFSP GPSHSRSLSQ PAFFSLDSLP 120 PLSPSPYRDS PSTSLSDPIS ADVTMEDRDG SSHTQLPPSP FTRGNSIRLG EILPPRKAHR 180 RSNSDIPFGF STIMQSSPPL VPLRSPGVLE RSVSVRENSV STKPIQLVKR ESEWDRDGDI 240 NAEGMGERKS EGEVVDDLFS AYMNLDNMDT LNSSGTEERN CNENREDLDS RASGTKTNGA 300 DSSENEAESS MNESGNSMNR ANLSSSTEKK EGIKRTAGGD IAPTTRHYRS VSMDSFMGKM 360 NFGDESPKLP PTGTRAGQHS HSNSMDGNSA TFSLDFGNGE FSGAELKKIM ANEKLAEIAM 420 TDPKRAKRIL ANRQSAARSK ERKMKYISEL EHKVQTLQTE ATTLSAQLTL LQRDSAGLTS 480 QNNELKFRLQ AMEQQAQLRD ALNEALTAEV QRLKLATQEL SANAHASSCL AQQLSMNPQM 540 FQLQHQQPPQ LNMYQAQQQT QPQPRQQNQS PQPQPPQQSR PPPQTQQQQT STGAKHELNQ

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence Send to blast

MEDTEEARND MMQRLQSSFG TSSSSIPKQH SSTSRPDVPQ LNASQIRAPI RPFFQNFSPD  60
NNKRPGIPPS HPHIPPASPY SQIPVSRPNA QALGSQSFSP GPSHSRSLSQ PAFFSLDSLP  120
PLSPSPYRDS PSTSLSDPIS ADVTMEDRDG SSHTQLPPSP FTRGNSIRLG EILPPRKAHR  180
RSNSDIPFGF STIMQSSPPL VPLRSPGVLE RSVSVRENSV STKPIQLVKR ESEWDRDGDI  240
NAEGMGERKS EGEVVDDLFS AYMNLDNMDT LNSSGTEERN CNENREDLDS RASGTKTNGA  300
DSSENEAESS MNESGNSMNR ANLSSSTEKK EGIKRTAGGD IAPTTRHYRS VSMDSFMGKM  360
NFGDESPKLP PTGTRAGQHS HSNSMDGNSA TFSLDFGNGE FSGAELKKIM ANEKLAEIAM  420
TDPKRAKRIL ANRQSAARSK ERKMKYISEL EHKVQTLQTE ATTLSAQLTL LQRDSAGLTS  480
QNNELKFRLQ AMEQQAQLRD ALNEALTAEV QRLKLATQEL SANAHASSCL AQQLSMNPQM  540
FQLQHQQPPQ LNMYQAQQQT QPQPRQQNQS PQPQPPQQSR PPPQTQQQQT STGAKHELNQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010271435.1	0.0	PREDICTED: probable transcription factor PosF21 isoform X1
Refseq	XP_010271436.1	0.0	PREDICTED: probable transcription factor PosF21 isoform X1
TrEMBL	A0A1U8AXJ7	0.0	A0A1U8AXJ7_NELNU; probable transcription factor PosF21 isoform X1
STRING	XP_010271435.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-138	bZIP family protein