PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_016045-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 311aa    MW: 34973.5 Da    PI: 4.5782
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_016045-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.51.6e-09145188447
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                    +k+ rr  +NR AA rsR+RKk ++  Le k+  Le+e ++L  
  NNU_016045-RA 145 SKKRRRQLRNRDAAVRSRERKKIYVRDLEMKSRYLEGECRRLER 188
                    6999**********************************987764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-10139202No hitNo description
SMARTSM003380.0021141206IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.668144188IPR004827Basic-leucine zipper domain
PfamPF077165.2E-8146188IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.44E-10146202No hitNo description
CDDcd147046.00E-16147198No hitNo description
PROSITE patternPS000360149164IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MNDGEVQPDD GLLDQIDWVS FFDSIPDNLN QLAESPLGDS VSIQEPPSAL QISASTWIND  60
IEQLLMADDD EESREEDRRG QCEEFFADID FLVDGSADGS YEERVFKEGG STPESNVSDD  120
GREKEKSVGS EVKNGRDEAD DDPISKKRRR QLRNRDAAVR SRERKKIYVR DLEMKSRYLE  180
GECRRLERLL QCCIAENQTL HLYLQKDKGL GAPMTKLESA VLLLESLLLG SLLWFLGTMC  240
LSSLPGQLQT IPSATALENV GIKDQEIVSL RRGARNEVLG LGALRLFFKS KRCKATRAKI  300
KMNLPLLTVF V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146165KRRRQLRNRDAAVRSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010270593.10.0PREDICTED: bZIP transcription factor 60
TrEMBLA0A1U8B4B60.0A0A1U8B4B6_NELNU; bZIP transcription factor 60
STRINGXP_010270593.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.17e-07basic region/leucine zipper motif 60