PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_015909-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 149aa    MW: 16720.7 Da    PI: 5.5736
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_015909-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000472183955
                   TCHHHHHHHHHHHHHHH CS
            HLH 39 sKaeiLekAveYIksLq 55
                   +Ka++L  A++Y+k+Lq
  NNU_015909-RA  2 DKASVLGDAIKYLKQLQ 18
                   8***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.79E-5133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.7E-5130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MDKASVLGDA IKYLKQLQER VKILEEQTVK KRVESVVLVK RSHISADDDN SSDENNLDGG  60
RSDDEAALPE IEARVSDKDV LIRVHCEKQK GVVAKALAEI EKLHLTVVNT QQQRHPLWEI  120
SSQYHHSCCD GTRVLHESEG SCEASPFSF
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019054875.11e-106PREDICTED: transcription factor bHLH25-like isoform X2
SwissprotQ9T0724e-33BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A1U8Q9X01e-104A0A1U8Q9X0_NELNU; transcription factor bHLH25-like isoform X2
STRINGXP_010270356.11e-105(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-31bHLH family protein