PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_014940-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 301aa MW: 34632.3 Da PI: 8.3346 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.9 | 1.7e-52 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtd+elvv+yL++k++++++ + +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + NNU_014940-RA 7 LPPGFRFHPTDDELVVHYLCRKCASQSIAV-PIIAEIDLYKYDPWQLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGH-- 99 79*************************999.88***************6666689*************************************99.. PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kk Lvfy grap+gekt+W+mheyrl NNU_014940-RA 100 PKTIGIKKALVFYAGRAPRGEKTNWIMHEYRL 131 778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.24E-62 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.431 | 7 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.5E-28 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MTSHLQLPPG FRFHPTDDEL VVHYLCRKCA SQSIAVPIIA EIDLYKYDPW QLPGMALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKPIGHP KTIGIKKALV FYAGRAPRGE 120 KTNWIMHEYR LADVDRSARK KNSLRLDDWV LCRIYNKKGG REKNFTTFDR KSALAPSSTC 180 SDIEDQKPET ISYRRDILEQ RPATVTAPPM NDMMYFDTSD SIPKLHPDSS CSEHVVSPEF 240 TCEREVQSQP KWKDYEKPLG FQFNYMDAIG GAADNPFALL NHQSNELNPL QDMFMYLQKP 300 F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-81 | 3 | 163 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010268987.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-141 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A1U8AN94 | 0.0 | A0A1U8AN94_NELNU; NAC domain-containing protein 2-like | ||||
STRING | XP_010268987.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-143 | NAC family protein |