PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | NNU_014634-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 361aa MW: 38969.5 Da PI: 6.5225 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.4e-10 | 229 | 287 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l l+ l++e+ NNU_014634-RA 229 KRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATTLSAQLTLLQRDTNGLTAEN 287 9*********************************************9998888777766 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.6E-16 | 225 | 289 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.955 | 227 | 290 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.1E-9 | 229 | 284 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.8E-11 | 229 | 283 | No hit | No description |
SuperFamily | SSF57959 | 5.06E-11 | 229 | 280 | No hit | No description |
CDD | cd14703 | 8.74E-25 | 230 | 279 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 361 aa Download sequence Send to blast |
MEKDKSPCHG GGLPPPSSRY SGFPSAGNSF NVKSEPSAST LPPPSPASTS EASHFGHAMS 60 SDSSRFSHDI SRMPDFPPKN IGHRRAQSEI LSLPDDISFD NELGVVGPGD VPSLSDETEE 120 DLFSMYIDME KFSASSATSG FQAGETSTAA APPPAPAPAP TTAAPSAQNL SVGSDEKRRV 180 RHQHSQSMDG STSIKTEFLV SGTEGPSAAE TKKAMSAAKL ADLALIDPKR AKRIWANRQS 240 AARSKERKMR YISELERKVQ TLQTEATTLS AQLTLLQRDT NGLTAENNEL KLRLQTMEQQ 300 VHLQDALNEA LRDEVQRLKL MTGQAISNGG TMMNYGSAFG GDANGLDQIR IRIYLNLIRY 360 C |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010268265.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_010268266.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_010268267.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-127 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A1U8AY26 | 0.0 | A0A1U8AY26_NELNU; probable transcription factor PosF21 | ||||
STRING | XP_010268265.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-108 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|