PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_014195-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Nin-like | ||||||||
Protein Properties | Length: 935aa MW: 103080 Da PI: 6.9553 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.3 | 7.2e-29 | 519 | 569 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lg+c+T++KriCRq+GI+RWP+Rki+++ NNU_014195-RA 519 EKSISLEVLQQYFAGSLKDAAKSLGICPTTMKRICRQHGISRWPSRKINKV 569 799**********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.587 | 508 | 589 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 5.7E-26 | 522 | 569 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 4.58E-21 | 822 | 913 | No hit | No description |
PROSITE profile | PS51745 | 20.49 | 830 | 912 | IPR000270 | PB1 domain |
SMART | SM00666 | 1.2E-24 | 830 | 912 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 1.1E-25 | 830 | 911 | No hit | No description |
Pfam | PF00564 | 7.5E-18 | 831 | 911 | IPR000270 | PB1 domain |
CDD | cd06407 | 8.05E-36 | 831 | 911 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0010167 | Biological Process | response to nitrate | ||||
GO:0042128 | Biological Process | nitrate assimilation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 935 aa Download sequence Send to blast |
MQYMFSLNYN LLLQLFASHL RISHYPVNPD SLTGNITGND DKRRHVPTPV LIPLQENLDG 60 YSVIKERMMQ ALRYFKELTE QHVLAQVWAP VKNGGQYVLT TSGQPFVLDP NSNGLLQYRT 120 VSLMYKFSVD GENDGDLGLP GRVFRQKLPE WTPNVQYYSS KEYPRLSHAL HYNVQGTLAL 180 PVFEPSRQSC VGVVELIMTS QKINYAPEVD KVCKALEAVN LKSSEVLDHQ NIQICNEGHQ 240 NALAEILEIL TVVCETHKLP LAQTWVPCKH RNILAYGGGM KKSCTSFYGS CMGQVCMSTT 300 DAAFYVVDAH MWGFHEACTE HHLQKGQGVA GRAFLSHGSC FSRDIIKFRK TEYPLVHYAR 360 MFGLTSCFAV CLRSTHTGSD DYILEFFLPP SITDSREQDT LLDSLLGSMK QHFRSLKVAS 420 GKGLEEERSV EIIKISADDN LELEGVKISS AMETPVGNND LPNGVEKLHQ DSQEQQSIVE 480 IDGQKDGENV LKTDGTHSTL SVPDKGMKKP LERRRGKTEK SISLEVLQQY FAGSLKDAAK 540 SLGICPTTMK RICRQHGISR WPSRKINKVN RSLSKLKRVI ESVQGADGTF SLTSLATSPL 600 PIAVGSSSWP VSLKGPNQPH SPSSKPLIFH RAKDGESPVN KTAEGDGNGD KEDQIPGGGR 660 LLAHQELVNR QSMPHLGFPK VPNGSRTKSG SGEESTGNPT SHGSCQSSPA TEASPLNDPC 720 TTSNQELGIN TCSSFVLVSQ PNGELNLSAA YSIPSAHITT LPQTPFGGML IEDARSSKDL 780 RNLCTTAPEA CLDERIPESS WTNPLCPNQA PQQVAPPLSH TMPHTQDVRN VTIKAAYKED 840 IIRFRLSLTS GVAELKEEVA KRLKLEVGTF EIKYLDDDHE WVLLACDADL HECMDISKLS 900 GGHMIRLSVQ DITANFXSSC ESSGHKVGKI VIQIL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal. {ECO:0000269|PubMed:18826430}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00449 | DAP | Transfer from AT4G24020 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not regulated by the N source or by nitrate. {ECO:0000269|PubMed:18826430}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010267558.1 | 0.0 | PREDICTED: protein NLP6-like isoform X2 | ||||
Swissprot | Q84TH9 | 0.0 | NLP7_ARATH; Protein NLP7 | ||||
TrEMBL | A0A1U8AX12 | 0.0 | A0A1U8AX12_NELNU; protein NLP6-like isoform X2 | ||||
STRING | XP_010267557.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 0.0 | NIN like protein 7 |