PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_014195-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family Nin-like
Protein Properties Length: 935aa    MW: 103080 Da    PI: 6.9553
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_014195-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.37.2e-29519569252
         RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                    ek+isle+l++yF++++kdAAk+Lg+c+T++KriCRq+GI+RWP+Rki+++
  NNU_014195-RA 519 EKSISLEVLQQYFAGSLKDAAKSLGICPTTMKRICRQHGISRWPSRKINKV 569
                    799**********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.587508589IPR003035RWP-RK domain
PfamPF020425.7E-26522569IPR003035RWP-RK domain
SuperFamilySSF542774.58E-21822913No hitNo description
PROSITE profilePS5174520.49830912IPR000270PB1 domain
SMARTSM006661.2E-24830912IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.1E-25830911No hitNo description
PfamPF005647.5E-18831911IPR000270PB1 domain
CDDcd064078.05E-36831911No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0010118Biological Processstomatal movement
GO:0010167Biological Processresponse to nitrate
GO:0042128Biological Processnitrate assimilation
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 935 aa     Download sequence    Send to blast
MQYMFSLNYN LLLQLFASHL RISHYPVNPD SLTGNITGND DKRRHVPTPV LIPLQENLDG  60
YSVIKERMMQ ALRYFKELTE QHVLAQVWAP VKNGGQYVLT TSGQPFVLDP NSNGLLQYRT  120
VSLMYKFSVD GENDGDLGLP GRVFRQKLPE WTPNVQYYSS KEYPRLSHAL HYNVQGTLAL  180
PVFEPSRQSC VGVVELIMTS QKINYAPEVD KVCKALEAVN LKSSEVLDHQ NIQICNEGHQ  240
NALAEILEIL TVVCETHKLP LAQTWVPCKH RNILAYGGGM KKSCTSFYGS CMGQVCMSTT  300
DAAFYVVDAH MWGFHEACTE HHLQKGQGVA GRAFLSHGSC FSRDIIKFRK TEYPLVHYAR  360
MFGLTSCFAV CLRSTHTGSD DYILEFFLPP SITDSREQDT LLDSLLGSMK QHFRSLKVAS  420
GKGLEEERSV EIIKISADDN LELEGVKISS AMETPVGNND LPNGVEKLHQ DSQEQQSIVE  480
IDGQKDGENV LKTDGTHSTL SVPDKGMKKP LERRRGKTEK SISLEVLQQY FAGSLKDAAK  540
SLGICPTTMK RICRQHGISR WPSRKINKVN RSLSKLKRVI ESVQGADGTF SLTSLATSPL  600
PIAVGSSSWP VSLKGPNQPH SPSSKPLIFH RAKDGESPVN KTAEGDGNGD KEDQIPGGGR  660
LLAHQELVNR QSMPHLGFPK VPNGSRTKSG SGEESTGNPT SHGSCQSSPA TEASPLNDPC  720
TTSNQELGIN TCSSFVLVSQ PNGELNLSAA YSIPSAHITT LPQTPFGGML IEDARSSKDL  780
RNLCTTAPEA CLDERIPESS WTNPLCPNQA PQQVAPPLSH TMPHTQDVRN VTIKAAYKED  840
IIRFRLSLTS GVAELKEEVA KRLKLEVGTF EIKYLDDDHE WVLLACDADL HECMDISKLS  900
GGHMIRLSVQ DITANFXSSC ESSGHKVGKI VIQIL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal. {ECO:0000269|PubMed:18826430}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00449DAPTransfer from AT4G24020Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not regulated by the N source or by nitrate. {ECO:0000269|PubMed:18826430}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267558.10.0PREDICTED: protein NLP6-like isoform X2
SwissprotQ84TH90.0NLP7_ARATH; Protein NLP7
TrEMBLA0A1U8AX120.0A0A1U8AX12_NELNU; protein NLP6-like isoform X2
STRINGXP_010267557.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.10.0NIN like protein 7
Publications ? help Back to Top
  1. Xu N, et al.
    The Arabidopsis NRG2 Protein Mediates Nitrate Signaling and Interacts with and Regulates Key Nitrate Regulators.
    Plant Cell, 2016. 28(2): p. 485-504
    [PMID:26744214]
  2. Karve R,Suárez-Román F,Iyer-Pascuzzi AS
    The Transcription Factor NIN-LIKE PROTEIN7 Controls Border-Like Cell Release.
    Plant Physiol., 2016. 171(3): p. 2101-11
    [PMID:27221617]
  3. Yu LH, et al.
    Overexpression of Arabidopsis NLP7 improves plant growth under both nitrogen-limiting and -sufficient conditions by enhancing nitrogen and carbon assimilation.
    Sci Rep, 2016. 6: p. 27795
    [PMID:27293103]
  4. Menz J,Li Z,Schulze WX,Ludewig U
    Early nitrogen-deprivation responses in Arabidopsis roots reveal distinct differences on transcriptome and (phospho-) proteome levels between nitrate and ammonium nutrition.
    Plant J., 2016. 88(5): p. 717-734
    [PMID:27419465]
  5. Yan D, et al.
    NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis.
    Nat Commun, 2016. 7: p. 13179
    [PMID:27731416]
  6. Guan P, et al.
    Interacting TCP and NLP transcription factors control plant responses to nitrate availability.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(9): p. 2419-2424
    [PMID:28202720]
  7. Liu KH, et al.
    Discovery of nitrate-CPK-NLP signalling in central nutrient-growth networks.
    Nature, 2017. 545(7654): p. 311-316
    [PMID:28489820]
  8. Li Z, et al.
    The Arabidopsis CPSF30-L gene plays an essential role in nitrate signaling and regulates the nitrate transceptor gene NRT1.1.
    New Phytol., 2017. 216(4): p. 1205-1222
    [PMID:28850721]
  9. Cao H, et al.
    Overexpression of the Maize ZmNLP6 and ZmNLP8 Can Complement the Arabidopsis Nitrate Regulatory Mutant nlp7 by Restoring Nitrate Signaling and Assimilation.
    Front Plant Sci, 2017. 8: p. 1703
    [PMID:29051766]
  10. Konishi N,Okubo T,Yamaya T,Hayakawa T,Minamisawa K
    Nitrate Supply-Dependent Shifts in Communities of Root-Associated Bacteria in Arabidopsis.
    Microbes Environ., 2017. 32(4): p. 314-323
    [PMID:29187692]
  11. Karve RA,Iyer-Pascuzzi AS
    Further insights into the role of NIN-LIKE PROTEIN 7 (NLP7) in root cap cell release.
    Plant Signal Behav, 2018. 13(1): p. e1414122
    [PMID:29215953]
  12. Zhao L, et al.
    The Arabidopsis NLP7 gene regulates nitrate signaling via NRT1.1-dependent pathway in the presence of ammonium.
    Sci Rep, 2018. 8(1): p. 1487
    [PMID:29367694]