PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_014031-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 589aa    MW: 66060.9 Da    PI: 4.3501
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_014031-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.3e-52191461128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    l+pGfrFhPtdeelv++yLk+k+ gk++++ e+i+evd+yk+ePwdLp  +k+k+++ +wyfF   dkky +g+r+nrat++gyWk+tgkd++v +
  NNU_014031-RA  19 LAPGFRFHPTDEELVSYYLKRKILGKPFRF-EAISEVDLYKTEPWDLPgmSKLKTRDLQWYFFGALDKKYGNGSRTNRATDQGYWKTTGKDRPVRH 113
                    579**************************9.89***************6337778888************************************** PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++vg+kktLvf+ gr p+ge+++Wvmheyrl
  NNU_014031-RA 114 -NNKTVGMKKTLVFHIGRPPRGERANWVMHEYRL 146
                    .999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.26E-628169IPR003441NAC domain
PROSITE profilePS5100558.66619169IPR003441NAC domain
PfamPF023653.2E-2721146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009819Biological Processdrought recovery
GO:0010150Biological Processleaf senescence
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    Send to blast
MPSVCISKRS HAMGGEAALA PGFRFHPTDE ELVSYYLKRK ILGKPFRFEA ISEVDLYKTE  60
PWDLPGMSKL KTRDLQWYFF GALDKKYGNG SRTNRATDQG YWKTTGKDRP VRHNNKTVGM  120
KKTLVFHIGR PPRGERANWV MHEYRLVDEE LELAGVLQDA YVLCRIFQKS GSGPKNGEQY  180
GAPFIEEEWD ENENVLIPQG EDGDNVLLNG GDDIYFSVHD FEQDLGIDPS QSTPAPLNFN  240
SGNRFNHLEG PGDLLKDDEN LNCPEEWQDL KDDQELLIGM DKSENLPELP DDRWFADLLE  300
QYQMEPTAIQ DDHFVELNDL VNPMGDDSHG IDHINEELKF FDSSDSLLIN DGLFLEINDL  360
QNHVEAGPSE FEMVDEYLMY LDAVEDDLKT PTFSESILNL EVNTEIGEVL PEGPQPFILQ  420
DGEEGASSSK QKPDTTKFSP DVQHGNGWDN NLVKHVSRML GSIPAPPSFA AEFPLKEAAI  480
GQNKANEASN PVRVTAGMIQ ISGMTVSGGR KCYSLGKSNA DLFLSYGMAR DGVMAAEQLI  540
NNSVALEPMA NILSGKSGSL MIRCGFYFTF FWVLILSVSF KIGSYIYTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-461617514171NO APICAL MERISTEM PROTEIN
1ut4_B2e-461617514171NO APICAL MERISTEM PROTEIN
1ut7_A2e-461617514171NO APICAL MERISTEM PROTEIN
1ut7_B2e-461617514171NO APICAL MERISTEM PROTEIN
3swm_A2e-461617517174NAC domain-containing protein 19
3swm_B2e-461617517174NAC domain-containing protein 19
3swm_C2e-461617517174NAC domain-containing protein 19
3swm_D2e-461617517174NAC domain-containing protein 19
3swp_A2e-461617517174NAC domain-containing protein 19
3swp_B2e-461617517174NAC domain-containing protein 19
3swp_C2e-461617517174NAC domain-containing protein 19
3swp_D2e-461617517174NAC domain-containing protein 19
3ulx_A1e-4681754174Stress-induced transcription factor NAC1
4dul_A2e-461617514171NAC domain-containing protein 19
4dul_B2e-461617514171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00343DAPTransfer from AT3G10500Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267268.10.0PREDICTED: NAC domain-containing protein 53
TrEMBLA0A1U8AWB70.0A0A1U8AWB7_NELNU; NAC domain-containing protein 53
STRINGXP_010267268.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-122NAC domain containing protein 53