PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_013886-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Dof | ||||||||
Protein Properties | Length: 215aa MW: 23742.1 Da PI: 8.1134 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 128.8 | 1.6e-40 | 16 | 76 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCdstntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s NNU_013886-RA 16 EQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRS 76 57899****************************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 9.0E-29 | 11 | 71 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.5E-33 | 18 | 74 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.562 | 20 | 74 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 22 | 58 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence Send to blast |
MQDPSTFQPV KPHFPEQEQL KCPRCDSTNT KFCYYNNYNL SQPRHFCKNC RRYWTKGGAL 60 RNIPVGGGSR KNTKRSSNPK RSTSSSSTQN AAVPKPEPTG TFSPPVTTID HDRRMLDISG 120 SFSSLLASNG QMGNLLDGLN PSSSGTRTLQ FGEFAENSNS SSIENSTLEL QGNNNQESFL 180 GIQDGDSSCW GSGNGWPDLA IYTPDWSLAF MNFVY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00199 | DAP | Transfer from AT1G51700 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010267036.1 | 1e-150 | PREDICTED: dof zinc finger protein DOF3.1-like | ||||
Swissprot | O82155 | 9e-45 | DOF17_ARATH; Dof zinc finger protein DOF1.7 | ||||
TrEMBL | A0A1U8ALW5 | 1e-149 | A0A1U8ALW5_NELNU; dof zinc finger protein DOF3.1-like | ||||
STRING | XP_010267036.1 | 1e-149 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 2e-42 | DOF zinc finger protein 1 |
Publications ? help Back to Top | |||
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