PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_013288-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 297aa MW: 34473.3 Da PI: 7.0809 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149.3 | 2e-46 | 15 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yL+k v gk+l++ ++i ++iy+++PwdLp +k +e+ewyfF++rdkk +g r++r+t++g+Wkatg+d+++ s NNU_013288-RA 15 LPGFRFHPTEEELLDFYLRKMVFGKNLHF-DIIGFLNIYHYDPWDLPGLAKIGEREWYFFVPRDKKPGNGGRPHRTTEHGFWKATGSDRPIRSLsd 109 59*************************99.99***************8888899*************************************99766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy grap+g+ktdWvm+eyr+ NNU_013288-RA 110 PKRIIGLKKTLVFYMGRAPRGSKTDWVMNEYRM 142 6778***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.92E-57 | 13 | 161 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.381 | 14 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-24 | 16 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence Send to blast |
MDNHQPTTTT PDYQLPGFRF HPTEEELLDF YLRKMVFGKN LHFDIIGFLN IYHYDPWDLP 60 GLAKIGEREW YFFVPRDKKP GNGGRPHRTT EHGFWKATGS DRPIRSLSDP KRIIGLKKTL 120 VFYMGRAPRG SKTDWVMNEY RMPEASTLPK ENIVLCKIYR KATSLKVLEQ RAAMEEDSKP 180 SILVSPSPCA AMEEDFTLHE SQENLSPAST LPVMQHILVK IGGEEEHQKK HDKEEVYSKE 240 NASSTLPREG LRLARELPEL QLPRPSTLLD WTQDPLWTQL RSPWLDNWIP YANVLNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-46 | 16 | 161 | 17 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010266117.1 | 0.0 | PREDICTED: transcription factor JUNGBRUNNEN 1-like | ||||
Swissprot | Q10S65 | 1e-102 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A1U8ATC8 | 0.0 | A0A1U8ATC8_NELNU; transcription factor JUNGBRUNNEN 1-like | ||||
STRING | XP_010266117.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-100 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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