PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_011893-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 599aa MW: 65464.9 Da PI: 6.7617

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_011893-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.4	2.3e-11	427	485	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ +a l+s++ NNU_011893-RA 427 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSQN 485 9****************************************************999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-18	423	487	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.921	425	488	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.4E-11	427	484	No hit	No description
SuperFamily	SSF57959	4.01E-11	427	478	No hit	No description
Pfam	PF00170	5.3E-10	427	485	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.77E-23	428	479	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence Send to blast
MEDTEEARND TSQRLQSSFG ASSSSVPKQH LSTNRLDIPQ LNTSQIRAPM RSLPQNSSPD 60 SNKRPGIPPS HPNIPPASPY SQIPVSRSNA QPLGSQNFSP APSHSRSLSQ PAFFSFDSLP 120 PLSPSPYRDS PSTSLSDTAS ADVSMEDRDG SSNTPMPPSS SPFSRGNSVR MGESLPPRKT 180 HRRSSSDIPF GFSTVMQSSP PLIPLRGPGV LERSASARDN SGIAKPIQLV KRESEWDRDG 240 DIIAEGMGER KSEGEVVDDL FSAYMNLDNM DTLNSSGTEE KNCNANREDL DSRASGTKTN 300 GADSSDNEAE SSINESGSSV HRTNSSSTER KEGHKRSAGG DIAPTTRHCR SVSMDSFMGK 360 MHSLSDESPK LPPSPGTRPG QHSHSNSMDG NSAAFSLDFG NGEFSGAELK KIMGNEKLAE 420 IAMADPKRAK RILANRQSAA RSKERKMRYI SELEHKVQTL QTEATTLSAQ LTLLQRDSAG 480 LTSQNNELKF RLQAMEQQAQ LRDALNEALT AEVQRLKLVT QELGGDVSSC LAQQLSMNPQ 540 MFQLQHQQPP QMNIYQLQQQ QQQQPQQHQA QQQPQPQGPQ PTQTQQQQNS SATKHELNQ

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence Send to blast

MEDTEEARND TSQRLQSSFG ASSSSVPKQH LSTNRLDIPQ LNTSQIRAPM RSLPQNSSPD  60
SNKRPGIPPS HPNIPPASPY SQIPVSRSNA QPLGSQNFSP APSHSRSLSQ PAFFSFDSLP  120
PLSPSPYRDS PSTSLSDTAS ADVSMEDRDG SSNTPMPPSS SPFSRGNSVR MGESLPPRKT  180
HRRSSSDIPF GFSTVMQSSP PLIPLRGPGV LERSASARDN SGIAKPIQLV KRESEWDRDG  240
DIIAEGMGER KSEGEVVDDL FSAYMNLDNM DTLNSSGTEE KNCNANREDL DSRASGTKTN  300
GADSSDNEAE SSINESGSSV HRTNSSSTER KEGHKRSAGG DIAPTTRHCR SVSMDSFMGK  360
MHSLSDESPK LPPSPGTRPG QHSHSNSMDG NSAAFSLDFG NGEFSGAELK KIMGNEKLAE  420
IAMADPKRAK RILANRQSAA RSKERKMRYI SELEHKVQTL QTEATTLSAQ LTLLQRDSAG  480
LTSQNNELKF RLQAMEQQAQ LRDALNEALT AEVQRLKLVT QELGGDVSSC LAQQLSMNPQ  540
MFQLQHQQPP QMNIYQLQQQ QQQQPQQHQA QQQPQPQGPQ PTQTQQQQNS SATKHELNQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010263926.1	0.0	PREDICTED: probable serine/threonine-protein kinase mps1
TrEMBL	A0A1U8AEF1	0.0	A0A1U8AEF1_NELNU; probable serine/threonine-protein kinase mps1
STRING	XP_010263926.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-137	bZIP family protein