PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_010910-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 27172.7 Da PI: 4.9991 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.5 | 2.4e-14 | 10 | 57 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 lppGfrF P+deelv++yL k+++ ++ ++ +vd++ +ePw+Lp NNU_010910-RA 10 LPPGFRFYPSDEELVCHYLYGKIAKGVVSK-GTMVDVDLHICEPWQLPG 57 79************************9888.88**************93 PP | |||||||
2 | NAM | 44 | 7e-14 | 57 | 100 | 87 | 129 |
NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 gkd++v++ +++ vg++ktLvfy++rap+g kt W+mhe+rle NNU_010910-RA 57 GKDRPVFDPaSRAIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 100 899****9966777***************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.413 | 1 | 118 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.84E-37 | 8 | 118 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-14 | 11 | 99 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MGLRDIEATL PPGFRFYPSD EELVCHYLYG KIAKGVVSKG TMVDVDLHIC EPWQLPGKDR 60 PVFDPASRAI VGMRKTLVFY RNRAPNGIKT GWIMHEFRLE NPHMPPKEDW VLCRVFYKGK 120 GEHLTEPGLG NHEPETTIGA PSPTFAPFSH NHTVPSGYRQ VVDSFSSVLH HQDQSFLNLA 180 KQNPNFLGCP QEMNNTPMIE IDSRGGDEFG FLLDMSLEEN MGDGGTPSME EMKFDDDDNT 240 M |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010262496.1 | 1e-179 | PREDICTED: NAC domain-containing protein 21/22-like | ||||
TrEMBL | A0A1U8AJQ6 | 1e-178 | A0A1U8AJQ6_NELNU; NAC domain-containing protein 21/22-like | ||||
STRING | XP_010262496.1 | 1e-178 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 3e-53 | NAC domain containing protein 74 |