PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_010385-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 410aa    MW: 42985.6 Da    PI: 6.3605
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_010385-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.51.1e-21266328163
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    e+elkr+rrkq+NRe+ArrsR+RK+ae++eL+ kv++L+aeN aL+ e+++l+++++klk e+
  NNU_010385-RA 266 ERELKRQRRKQSNRESARRSRLRKQAETDELAMKVESLSAENIALRTEINRLTENSEKLKLEN 328
                    89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.2E-35193IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.5E-11139250No hitNo description
Gene3DG3DSA:1.20.5.1708.8E-19259325No hitNo description
PfamPF001701.7E-19266328IPR004827Basic-leucine zipper domain
SMARTSM003383.7E-20266330IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.15268331IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11269325No hitNo description
CDDcd147021.89E-23271319No hitNo description
PROSITE patternPS000360273288IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MGNNEAGTPS KSEKASSPAQ EQTSIHGYPD WAAIQAYYGP GVTIPPPYFN SAVASGHPPH  60
PYMWGPPQPL MPPYGAPYAA IYSHGGVYAH PSVSYGSHAH GPGFPPSPVV SEVMVATPLS  120
VEPPAKSLGS KDRGLMKKLR VGNDNAEGAA EGASGGLSQS AECGTEGSSD GSDGNTAGGN  180
KSKGKKSSNC MLSTGMDGKV ETQASVMPVA QVNIASSGAA VSLGGKTIGI APSPGMAPAL  240
ELRGSPNGKA KASTATVPSE LWLQDERELK RQRRKQSNRE SARRSRLRKQ AETDELAMKV  300
ESLSAENIAL RTEINRLTEN SEKLKLENAA LMEKLKNAEP GETTEMVSNN TETHEDASIS  360
TENFLSKVNN SGSVSIDDPR DTEIHENSNS GAKLHQLLES SPRTDTVVAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1282288RRSRLRK
2282289RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261472.10.0PREDICTED: common plant regulatory factor 1-like isoform X1
TrEMBLA0A1U8A3390.0A0A1U8A339_NELNU; common plant regulatory factor 1-like isoform X1
STRINGXP_010261472.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.15e-98G-box binding factor 3