PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_010152-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 567aa    MW: 63566.3 Da    PI: 4.6025
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_010152-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.91.4e-51181442128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    ppGfrFhPtdeelv +yLk+k+ +++l+l +vi+evd+yk++P++Lp +  +k+++++w+fFs+rd++y++g r nrat++gyWk tgkd+++   
  NNU_010152-RA  18 PPGFRFHPTDEELVLYYLKRKICRRRLKL-NVIAEVDVYKWDPEELPgQsVLKSGDRQWFFFSPRDRRYPNGGRLNRATRHGYWKVTGKDRNISY- 111
                    8****************************.99**************96447788999*************************************9. PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++++vg+kktLvfykgrap+ge+tdWvmhey++
  NNU_010152-RA 112 NSRTVGVKKTLVFYKGRAPSGERTDWVMHEYSI 144
                    999****************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.45E-5814166IPR003441NAC domain
PROSITE profilePS5100554.90317166IPR003441NAC domain
PfamPF023652.5E-2718144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MKMTQPSSDD FGDAKAWPPG FRFHPTDEEL VLYYLKRKIC RRRLKLNVIA EVDVYKWDPE  60
ELPGQSVLKS GDRQWFFFSP RDRRYPNGGR LNRATRHGYW KVTGKDRNIS YNSRTVGVKK  120
TLVFYKGRAP SGERTDWVMH EYSIDEEELK RCAAQDCYAL YKVFKKSGPG PKNGEQYGAP  180
FREEEWADED DPVETVQQPN EFASVDIFTV CDPGLPPSNG MDEILGPNTD DPGINQLLID  240
ELTHLLQQVD GEEEAQSTLM GAPFGEAISR EPSTVPQPWE QQHDARGSFD VTQSATSYRN  300
FYEAPEVTSA PNVSEQVSPV TAEEGFLEIN DLIDLEPSFS NMGSSKENLG FEETTGLDGP  360
DLYFDAAMFL EDLGQGTAAN SYIDNLGIDT GHIASRFNYQ LPSQLDDANQ ISSQLWTYDQ  420
RSNVFLSTES NQVFLSPPTS GVLHAGSSTN FGDTNQNQGS SGGDLPDSWF TSALWTFVES  480
IPTNPASASE NALRAFERVS SFGRNMQINA RNINSRRHHA NPTRRVGANR GFFLLSVLGV  540
VFAISWVLMM GTPLKDFRTF LRRFASS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-481814416140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261099.10.0PREDICTED: NAC domain-containing protein 17-like
TrEMBLA0A1U8AFF90.0A0A1U8AFF9_NELNU; NAC domain-containing protein 17-like
STRINGXP_010261099.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-123NAC domain containing protein 17