PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_010152-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 567aa MW: 63566.3 Da PI: 4.6025 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.9 | 1.4e-51 | 18 | 144 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppGfrFhPtdeelv +yLk+k+ +++l+l +vi+evd+yk++P++Lp + +k+++++w+fFs+rd++y++g r nrat++gyWk tgkd+++ NNU_010152-RA 18 PPGFRFHPTDEELVLYYLKRKICRRRLKL-NVIAEVDVYKWDPEELPgQsVLKSGDRQWFFFSPRDRRYPNGGRLNRATRHGYWKVTGKDRNISY- 111 8****************************.99**************96447788999*************************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfykgrap+ge+tdWvmhey++ NNU_010152-RA 112 NSRTVGVKKTLVFYKGRAPSGERTDWVMHEYSI 144 999****************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.45E-58 | 14 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.903 | 17 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-27 | 18 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 567 aa Download sequence Send to blast |
MKMTQPSSDD FGDAKAWPPG FRFHPTDEEL VLYYLKRKIC RRRLKLNVIA EVDVYKWDPE 60 ELPGQSVLKS GDRQWFFFSP RDRRYPNGGR LNRATRHGYW KVTGKDRNIS YNSRTVGVKK 120 TLVFYKGRAP SGERTDWVMH EYSIDEEELK RCAAQDCYAL YKVFKKSGPG PKNGEQYGAP 180 FREEEWADED DPVETVQQPN EFASVDIFTV CDPGLPPSNG MDEILGPNTD DPGINQLLID 240 ELTHLLQQVD GEEEAQSTLM GAPFGEAISR EPSTVPQPWE QQHDARGSFD VTQSATSYRN 300 FYEAPEVTSA PNVSEQVSPV TAEEGFLEIN DLIDLEPSFS NMGSSKENLG FEETTGLDGP 360 DLYFDAAMFL EDLGQGTAAN SYIDNLGIDT GHIASRFNYQ LPSQLDDANQ ISSQLWTYDQ 420 RSNVFLSTES NQVFLSPPTS GVLHAGSSTN FGDTNQNQGS SGGDLPDSWF TSALWTFVES 480 IPTNPASASE NALRAFERVS SFGRNMQINA RNINSRRHHA NPTRRVGANR GFFLLSVLGV 540 VFAISWVLMM GTPLKDFRTF LRRFASS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-48 | 18 | 144 | 16 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010261099.1 | 0.0 | PREDICTED: NAC domain-containing protein 17-like | ||||
TrEMBL | A0A1U8AFF9 | 0.0 | A0A1U8AFF9_NELNU; NAC domain-containing protein 17-like | ||||
STRING | XP_010261099.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 1e-123 | NAC domain containing protein 17 |