PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_010049-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 290aa    MW: 31813.7 Da    PI: 9.2635
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_010049-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.44.7e-16209265459
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevakl 59 
                     +r+rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L k+++e+ kk +a+l
  NNU_010049-RA 209 QQRQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENARLvKEQAEQTKKRYAQL 265
                    58****************************************445688999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-14205266No hitNo description
SMARTSM003389.1E-13206270IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.852208253IPR004827Basic-leucine zipper domain
PfamPF001701.3E-14209265IPR004827Basic-leucine zipper domain
CDDcd147071.12E-20210260No hitNo description
SuperFamilySSF579597.5E-11210260No hitNo description
PROSITE patternPS000360213228IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MASSKVMASS RSANSDLARQ SSIYSLTVSE NQNDQSRNFS GSMNMDELLR NMYGDNPAAE  60
IIPTAGPGSC ADGQANGAGM SSTLSKSVGG SKSVDEVWKE IAASGGDRKI RAIEEGQYFK  120
DSAIEQMTLE DFLAKAGAVR EEDVRIPQVA GAGQGVYSVD PLLANRFPPQ QIEGSIVGFG  180
NGVEGAAAAV GVGRGKRRIV EEPIDKVAQQ RQRRMIKNRE SAARSRERKQ AYTVELESLV  240
TQLEEENARL VKEQAEQTKK RYAQLMEYLI PVQEKRRPPR VLRRVHSVHW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010260968.10.0PREDICTED: G-box-binding factor 4-like
SwissprotP427772e-51GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A1U8AF390.0A0A1U8AF39_NELNU; G-box-binding factor 4-like
STRINGXP_010260969.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.12e-48G-box binding factor 4