PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_010030-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Trihelix | ||||||||
Protein Properties | Length: 86aa MW: 9115.01 Da PI: 4.6389 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 39.8 | 1.2e-12 | 51 | 86 | 1 | 36 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+laL+++r+em+ ++r++ lk+plWeevs+ NNU_010030-RA 51 RWPRQETLALLKIRSEMDVAFRDSTLKGPLWEEVSR 86 8*********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence Send to blast |
MLGVSGLTGN SSGGATDGNH EGEVGAVGSI AGGFGEEERG REGERNLAGN RWPRQETLAL 60 LKIRSEMDVA FRDSTLKGPL WEEVSR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010260937.1 | 7e-53 | PREDICTED: trihelix transcription factor GT-2-like | ||||
TrEMBL | A0A1U8AF15 | 2e-51 | A0A1U8AF15_NELNU; trihelix transcription factor GT-2-like | ||||
STRING | XP_010260937.1 | 3e-52 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 5e-19 | Trihelix family protein |