PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_009790-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 462aa    MW: 51292.1 Da    PI: 4.7011
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_009790-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.89e-5361341129
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    lppGfrFhPtd elv++yLk+kv gk+l++ e+i+e+diyk+ PwdL+ k ++k+++ ewyfF++rdkkya+g r+nr+t+ gyWk+tgkd++v +
  NNU_009790-RA   6 LPPGFRFHPTDGELVQYYLKRKVLGKPLRF-EAISEIDIYKFAPWDLReKsCLKNRDLEWYFFCPRDKKYASGPRTNRTTEIGYWKTTGKDRTVRH 100
                    79**************************99.89**************84347777888************************************** PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +++ vg+kktLvf++gr+p+g +tdWvmheyrle
  NNU_009790-RA 101 -NSQIVGMKKTLVFHTGRSPRGIRTDWVMHEYRLE 134
                    .999*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-623156IPR003441NAC domain
PROSITE profilePS5100557.916156IPR003441NAC domain
PfamPF023652.4E-287133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MSRPTLPPGF RFHPTDGELV QYYLKRKVLG KPLRFEAISE IDIYKFAPWD LREKSCLKNR  60
DLEWYFFCPR DKKYASGPRT NRTTEIGYWK TTGKDRTVRH NSQIVGMKKT LVFHTGRSPR  120
GIRTDWVMHE YRLEDKDLAT AGIFQGAYVL CRIFQKSGPG PRNGEQYGAP FREEDWEDDV  180
NDPFSLPLAD PGSPSILLDD DQNVSIVPGS AFGSSLEPIP CQAGPSNNTS DHTLPEDDDI  240
VSLLALFGNE EEVLVSTSNV SSESPQSSNV GVAHLDGYGF YNSLEDIITL EELNKIHFPS  300
SCLEAEYPLD QTHIWGSSSF LELKDLELPL EDPTVHGADN LFLDPLACNS NYDNIEGLPG  360
PALPLALPAL GLSRCNTLPE GSSIEEELAP FFKDNGNGAN ASGGQDALYN ISSSSKNFQE  420
GGKQQALARG SFHYPRCHSV VRNRHSCSDS CCTDEQSPIM RS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-47515714169Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010260495.10.0PREDICTED: NAC domain-containing protein 82-like
TrEMBLA0A1U8A6E30.0A0A1U8A6E3_NELNU; NAC domain-containing protein 82-like
STRINGXP_010260495.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-88NAC domain containing protein 2