PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_008593-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 300aa    MW: 32359 Da    PI: 6.4271
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_008593-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.3e-10219277563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l +l+     l++e+
  NNU_008593-RA 219 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLTMLQRDTNGLTAEN 277
                    9**********************************************999888877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-15215279IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944217280IPR004827Basic-leucine zipper domain
PfamPF001706.2E-9219267IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-8219267No hitNo description
SuperFamilySSF579594.78E-11219270No hitNo description
CDDcd147032.03E-25220269No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEKDKPPCHG GGLPPPSARY SAFSSPGNNF TAKSEPSSSP MPPPAPVSTP ESSHFGHGLS  60
SDTNHFSHDI SRMPDFPPKN LGHRRAQSEI LSLPDDISFD SDLGVVGPGD GPSLSDDTEE  120
DLFSMYVDME KFSASSATSG FQAGERSTAA ATATPSAENL VVGANERPRV RHQHSQSMDG  180
STLIKSELLV SGTEGPSAAE TKKAMSAAKL ADLALIDPKR AKRIWANRQS AARSKERKMR  240
YIAELERKVQ TLQTEATTLS AQLTMLQRDT NGLTAENNEL KLRLQTMEQQ VHLQDGKCSI
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010258520.10.0PREDICTED: probable transcription factor PosF21 isoform X1
SwissprotQ040881e-119POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A1U7ZXK10.0A0A1U7ZXK1_NELNU; probable transcription factor PosF21 isoform X1
STRINGXP_010258520.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-123bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]