PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_008352-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 185aa MW: 21782.1 Da PI: 8.2199 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79.9 | 5.5e-25 | 23 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 lp+G+rF Ptd+elv +yL +k+++k+l+++ + i+ ++y+ P++L ++ ++e++fF++ + ++r r++ g+Wk g++++ NNU_008352-RA 23 LPVGYRFIPTDQELVLHYLLNKLQSKPLPCSVIvdISADELYSKPPNQLGINL-FAREELFFFIHYNG----NHRVDRMVGdgIGRWKIIGEETST 113 799************************7773322567778*********8433.35679999998654....56899977723567********** PP NAM 93 lskkgel.vglkktLvfykgrapkgektdWvmheyrl 128 +s +g + v k +L +y+g++++g++t+Wvm e +l NNU_008352-RA 114 YSWEGFEfVFKKISLCYYSGKRSRGRRTKWVMVEHHL 150 99866552666678********************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.15E-31 | 15 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.131 | 23 | 179 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.9E-14 | 24 | 150 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MECERVLQED SSTFDYHEGL MDLPVGYRFI PTDQELVLHY LLNKLQSKPL PCSVIVDISA 60 DELYSKPPNQ LGINLFAREE LFFFIHYNGN HRVDRMVGDG IGRWKIIGEE TSTYSWEGFE 120 FVFKKISLCY YSGKRSRGRR TKWVMVEHHL IREHKVKNTN LKVRTQKRSS ITICCLSFTH 180 LEFVI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-16 | 18 | 150 | 10 | 140 | Stress-induced transcription factor NAC1 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 4e-20 | NAC domain containing protein 47 |