PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_007583-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 27176.4 Da PI: 6.9853 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.3 | 5e-07 | 70 | 121 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++ ++L l + + ++ +K +K+ iL A++ +++L NNU_007583-RA 70 TKACREKMRRDRLNDRHDNLFLELCSiLEPGRLPKADKVVILNDATRLLNQL 121 5678***********977777766666666699**************99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.712 | 66 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.62E-4 | 70 | 126 | No hit | No description |
Pfam | PF00010 | 1.5E-4 | 70 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.88E-9 | 72 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.4E-8 | 73 | 146 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MDSDQNCSWF VEYMDDVQAA EYLWPPQVIS DQAVSGLGLG LEVLLKDENC AEKSCLKKRG 60 RIESSAGPGT KACREKMRRD RLNDRHDNLF LELCSILEPG RLPKADKVVI LNDATRLLNQ 120 LHLEAQKLKE TNDVLKVTIQ NLKVVIRCIP TDTEKVELRD EKVKLKAEKE RMEQMVKGLC 180 VPCPFVPHHT FPAATTTYSV NGKNIPYQPS YLSPMAMWQW MPSASWDTTQ DHVLRPPVA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010256783.1 | 1e-154 | PREDICTED: transcription factor ILR3-like | ||||
TrEMBL | A0A1U8A5X5 | 1e-153 | A0A1U8A5X5_NELNU; transcription factor ILR3-like | ||||
STRING | XP_010256783.1 | 1e-154 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 2e-45 | bHLH family protein |