PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_006564-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Dof | ||||||||
Protein Properties | Length: 221aa MW: 23153.9 Da PI: 7.7345 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.7 | 1.4e-39 | 24 | 84 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrn+P+Ggg+rkn k+s NNU_006564-RA 24 EQEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPIGGGSRKNAKRS 84 57899****************************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-27 | 21 | 82 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 7.9E-34 | 26 | 82 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.488 | 28 | 82 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 30 | 66 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MPSESADRRL AKAQHMGAPA PPPEQEHLPC PRCDSTNTKF CYYNNYNLSQ PRHFCKSCRR 60 YWTQGGTLRN IPIGGGSRKN AKRSRTISSS SSSQDPIPAT PASVSLAPDP DFSLPTRGDL 120 NLDVNVSGSF TSLLNTQGPG FLALGGFGFG LSSGFEDLGF GLGRGTWPLL EAVDIGCGAS 180 AGGGGGGLTN WPVATGESGI VEGDCFTWPD LAISMPGKGL K |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010255083.1 | 1e-161 | PREDICTED: dof zinc finger protein DOF3.4 | ||||
TrEMBL | A0A1U8A1U7 | 1e-159 | A0A1U8A1U7_NELNU; dof zinc finger protein DOF3.4 | ||||
STRING | XP_010255083.1 | 1e-160 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66940.1 | 2e-39 | Dof family protein |