PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_004689-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28522.8 Da PI: 5.8839 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 52.8 | 1.3e-16 | 28 | 104 | 50 | 127 |
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 ++ ++e+ewyf+++rd+ky++++ ++ +++gyWkatg dk++++ +g ++g+kk+L g +pk++ +dW+ yr NNU_004689-RA 28 HTVEKEQEWYFYAPRDRKYPKENMPKHFATNGYWKATGPDKDIKDGNGMNIGVKKSLNRV-GLNPKSKISDWIQIKYR 104 3445788********************8888***************************99.999999*****988887 PP | |||||||
2 | NAM | 50 | 9.5e-16 | 106 | 162 | 51 | 107 |
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLv 107 v ++e+ewyf+++rd+ky++g+++n++t++gyWkatg +k++++ +g ++g+kk+L+ NNU_004689-RA 106 VGEKEQEWYFYTPRDRKYTKGNEPNQSTTNGYWKATGANKDIKDGNGMNIGVKKSLM 162 556789************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.497 | 1 | 173 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-15 | 23 | 108 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-4 | 25 | 104 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.84E-17 | 108 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.4E-5 | 110 | 161 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MVMKITLSNN IVLLTAYVAE TLPNISRHTV EKEQEWYFYA PRDRKYPKEN MPKHFATNGY 60 WKATGPDKDI KDGNGMNIGV KKSLNRVGLN PKSKISDWIQ IKYRHVGEKE QEWYFYTPRD 120 RKYTKGNEPN QSTTNGYWKA TGANKDIKDG NGMNIGVKKS LMDDYVLCRI YEKKRGDSNR 180 INAPIVEANE SDEVEIDVED EFEVQEEEKD QGQGATANRE KEGMNKASEG VDRVENGISQ 240 VNVGVEEVK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-15 | 21 | 174 | 61 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-15 | 21 | 174 | 61 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-15 | 21 | 174 | 61 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-15 | 21 | 174 | 61 | 166 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-15 | 21 | 174 | 61 | 166 | NAC domain-containing protein 19 |
4dul_B | 1e-15 | 21 | 174 | 61 | 166 | NAC domain-containing protein 19 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019052656.1 | 4e-62 | PREDICTED: NAC domain-containing protein 13-like | ||||
TrEMBL | A0A1U8Q3Q1 | 9e-61 | A0A1U8Q3Q1_NELNU; NAC domain-containing protein 13-like | ||||
STRING | XP_010251982.1 | 5e-47 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 1e-19 | NAC domain containing protein 25 |