PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_004688-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 444aa    MW: 51123.2 Da    PI: 4.6801
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_004688-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM431.4e-131460148
            NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                   lp Gf+F Ptdeel+ +yL++k+++ +l++ ++i+e++iy+++P++L 
  NNU_004688-RA 14 LPLGFKFVPTDEELIAYYLAEKMRDPTLKI-DIITELNIYQFDPEQLI 60
                   699***************************.99*************95 PP

2NAM101.11.6e-3110220234128
            NAM  34 ikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123
                     ++  +++++P+++        +++++e+ewyfF++rd+ky++g+r++r+t++gyWkatg dk++++ +ge++g+kk Lvfykg ++kg+kt+W+m
  NNU_004688-RA 102 PTDETLLSADPESMIDllkkyrHTSEKEQEWYFFTPRDRKYPKGNRPKRSTTNGYWKATGADKDIKDGNGENIGVKKCLVFYKGLTQKGTKTNWIM 197
                    45668999999998533455544455778******************************************************************* PP

            NAM 124 heyrl 128
                    +eyr+
  NNU_004688-RA 198 QEYRI 202
                    ***97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.28E-141163IPR003441NAC domain
PROSITE profilePS5100544.78514229IPR003441NAC domain
PfamPF023651.5E-2315202IPR003441NAC domain
Gene3DG3DSA:2.40.50.1406.9E-480108IPR012340Nucleic acid-binding, OB-fold
SuperFamilySSF1019415.49E-34107229IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MERRPWKNGE SLILPLGFKF VPTDEELIAY YLAEKMRDPT LKIDIITELN IYQFDPEQLI  60
DFLGIDIFNG KKLEDVVLVF REDGFERLLT ETGETKDDSM LPTDETLLSA DPESMIDLLK  120
KYRHTSEKEQ EWYFFTPRDR KYPKGNRPKR STTNGYWKAT GADKDIKDGN GENIGVKKCL  180
VFYKGLTQKG TKTNWIMQEY RIKEHQRAIN DESDHMKLDD FVLCKIYEKK RGNSNRNNAS  240
TVESYESDEV EVDVEGDGFE VKEEEKGQGQ GEAENREEEF IYQASEGAKR VDNGISQAYV  300
SAEEVKKDIF AAINQMMISG YNSYLPPLDP FNYTDGELHS SLYSTYTSFY VGNEFEPAPT  360
MHFQDLPPTS TSFNIGNNFV PPRTMPMQNL PPTPTYTSFN MGNNFAPTPT YTSLNMQSLA  420
PQYGMPIQNV DQRSKHMSKR QRNP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-3312923070166NO APICAL MERISTEM PROTEIN
1ut4_B4e-3312923070166NO APICAL MERISTEM PROTEIN
1ut7_A4e-3312923070166NO APICAL MERISTEM PROTEIN
1ut7_B4e-3312923070166NO APICAL MERISTEM PROTEIN
3swm_A4e-3312923073169NAC domain-containing protein 19
3swm_B4e-3312923073169NAC domain-containing protein 19
3swm_C4e-3312923073169NAC domain-containing protein 19
3swm_D4e-3312923073169NAC domain-containing protein 19
3swp_A4e-3312923073169NAC domain-containing protein 19
3swp_B4e-3312923073169NAC domain-containing protein 19
3swp_C4e-3312923073169NAC domain-containing protein 19
3swp_D4e-3312923073169NAC domain-containing protein 19
4dul_A4e-3312923070166NAC domain-containing protein 19
4dul_B4e-3312923070166NAC domain-containing protein 19
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019052656.10.0PREDICTED: NAC domain-containing protein 13-like
TrEMBLA0A1U8Q3Q10.0A0A1U8Q3Q1_NELNU; NAC domain-containing protein 13-like
STRINGXP_010251982.11e-131(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.36e-46NAC family protein