PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_004688-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 444aa MW: 51123.2 Da PI: 4.6801 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43 | 1.4e-13 | 14 | 60 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lp Gf+F Ptdeel+ +yL++k+++ +l++ ++i+e++iy+++P++L NNU_004688-RA 14 LPLGFKFVPTDEELIAYYLAEKMRDPTLKI-DIITELNIYQFDPEQLI 60 699***************************.99*************95 PP | |||||||
2 | NAM | 101.1 | 1.6e-31 | 102 | 202 | 34 | 128 |
NAM 34 ikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123 ++ +++++P+++ +++++e+ewyfF++rd+ky++g+r++r+t++gyWkatg dk++++ +ge++g+kk Lvfykg ++kg+kt+W+m NNU_004688-RA 102 PTDETLLSADPESMIDllkkyrHTSEKEQEWYFFTPRDRKYPKGNRPKRSTTNGYWKATGADKDIKDGNGENIGVKKCLVFYKGLTQKGTKTNWIM 197 45668999999998533455544455778******************************************************************* PP NAM 124 heyrl 128 +eyr+ NNU_004688-RA 198 QEYRI 202 ***97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.28E-14 | 11 | 63 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 44.785 | 14 | 229 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-23 | 15 | 202 | IPR003441 | NAC domain |
Gene3D | G3DSA:2.40.50.140 | 6.9E-4 | 80 | 108 | IPR012340 | Nucleic acid-binding, OB-fold |
SuperFamily | SSF101941 | 5.49E-34 | 107 | 229 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 444 aa Download sequence Send to blast |
MERRPWKNGE SLILPLGFKF VPTDEELIAY YLAEKMRDPT LKIDIITELN IYQFDPEQLI 60 DFLGIDIFNG KKLEDVVLVF REDGFERLLT ETGETKDDSM LPTDETLLSA DPESMIDLLK 120 KYRHTSEKEQ EWYFFTPRDR KYPKGNRPKR STTNGYWKAT GADKDIKDGN GENIGVKKCL 180 VFYKGLTQKG TKTNWIMQEY RIKEHQRAIN DESDHMKLDD FVLCKIYEKK RGNSNRNNAS 240 TVESYESDEV EVDVEGDGFE VKEEEKGQGQ GEAENREEEF IYQASEGAKR VDNGISQAYV 300 SAEEVKKDIF AAINQMMISG YNSYLPPLDP FNYTDGELHS SLYSTYTSFY VGNEFEPAPT 360 MHFQDLPPTS TSFNIGNNFV PPRTMPMQNL PPTPTYTSFN MGNNFAPTPT YTSLNMQSLA 420 PQYGMPIQNV DQRSKHMSKR QRNP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-33 | 129 | 230 | 70 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-33 | 129 | 230 | 70 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-33 | 129 | 230 | 70 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-33 | 129 | 230 | 70 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
3swm_B | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
3swm_C | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
3swm_D | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
3swp_A | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
3swp_B | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
3swp_C | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
3swp_D | 4e-33 | 129 | 230 | 73 | 169 | NAC domain-containing protein 19 |
4dul_A | 4e-33 | 129 | 230 | 70 | 166 | NAC domain-containing protein 19 |
4dul_B | 4e-33 | 129 | 230 | 70 | 166 | NAC domain-containing protein 19 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019052656.1 | 0.0 | PREDICTED: NAC domain-containing protein 13-like | ||||
TrEMBL | A0A1U8Q3Q1 | 0.0 | A0A1U8Q3Q1_NELNU; NAC domain-containing protein 13-like | ||||
STRING | XP_010251982.1 | 1e-131 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.3 | 6e-46 | NAC family protein |