PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_004655-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 150aa MW: 17570.9 Da PI: 9.6581 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 147.4 | 7.3e-46 | 14 | 142 | 1 | 126 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF Ptdeel++ yL++k+++ +l++ + ++evdiy+++P++L k + ++e ewyfF++r++ky++g+r++r t++g Wkatg dk+++ NNU_004655-RA 14 LPVGYRFAPTDEELITAYLAEKIRDLTLRI-HKMTEVDIYQFDPEELIaKyrYTGEREGEWYFFTPRSRKYPNGSRPRRDTTNGHWKATGADKPIK 108 799***************************.77**************733322333444************************************* PP NAM 94 skkgelvglkktLvfykg.rapkgektdWvmhey 126 +k+++++g+kk+Lvfy+g +++kg+kt+W+mhe NNU_004655-RA 109 DKNKNDIGVKKSLVFYSGsSSHKGSKTNWIMHEL 142 ****************9967899*********96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.05E-45 | 10 | 147 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 45.595 | 14 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.4E-24 | 15 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MERITWVNDE VRELPVGYRF APTDEELITA YLAEKIRDLT LRIHKMTEVD IYQFDPEELI 60 AKYRYTGERE GEWYFFTPRS RKYPNGSRPR RDTTNGHWKA TGADKPIKDK NKNDIGVKKS 120 LVFYSGSSSH KGSKTNWIMH ELGLLNNKGL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-41 | 14 | 144 | 15 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor of the NAC family associated with male fertility. {ECO:0000250}. | |||||
UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019052656.1 | 3e-61 | PREDICTED: NAC domain-containing protein 13-like | ||||
Swissprot | A2YMR0 | 7e-42 | NAC10_ORYSI; NAC transcription factor ONAC010 | ||||
Swissprot | Q8GY42 | 2e-42 | NAC25_ARATH; NAC transcription factor 25 | ||||
TrEMBL | A0A1U8Q3Q1 | 7e-60 | A0A1U8Q3Q1_NELNU; NAC domain-containing protein 13-like | ||||
STRING | XP_010251973.1 | 1e-108 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-39 | NAC family protein |