PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_004270-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 393aa    MW: 43893.2 Da    PI: 5.8385
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_004270-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.74.9e-32551971128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 
                    lp+G++F+P+d e++ e+L+ kv   +      ++++   i++  +iy+++P++Lp  +k++ ++++fF+k++++yatg+rk+r+         ++
  NNU_004270-RA  55 LPAGVKFDPSDAEIL-EHLAGKVGLGDskphlfIDEFIPtIERNeGIYYTHPENLP-GAKKDGSSVHFFHKTANAYATGQRKRRKihgqggkiEEH 148
                    799***********9.99****987775666553333333655557**********.55677899*******************867777666558 PP

            NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+k+v++ +g ++g+kk++v+y  +++ +k+ k++Wvmh+y+l
  NNU_004270-RA 149 VRWHKTGKTKPVIE-NGVVKGCKKIMVLYktSKKGSKPDKSNWVMHQYHL 197
                    89************.99************4434667778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-3740216IPR003441NAC domain
PROSITE profilePS5100530.77755216IPR003441NAC domain
PfamPF023652.8E-1356197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MAKSWLIDGR GIATKVKNAT QFSASKIKDL GAIRECPNCH HNIDNSDVSL EWPGLPAGVK  60
FDPSDAEILE HLAGKVGLGD SKPHLFIDEF IPTIERNEGI YYTHPENLPG AKKDGSSVHF  120
FHKTANAYAT GQRKRRKIHG QGGKIEEHVR WHKTGKTKPV IENGVVKGCK KIMVLYKTSK  180
KGSKPDKSNW VMHQYHLGTK DDVTEGEYVV SKIFYQQQQR HTDKTEAHLV NEEPDKVTLQ  240
VSPRTPKTNT PDIRRPGKRF LCDDINEDSE LECIKETAQP SPSVHLDDDR MDTAWWAGES  300
QAVEDPDLNV MDDILLCNEI LDSYAPADNS GLRPIPNFSE YGCSRSDALI ADGNTASGIP  360
SLDDIEIDTP PDFHLADLQF GSQESIMGWL DRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010251054.10.0PREDICTED: NAC domain-containing protein 8
TrEMBLA0A1U7ZE110.0A0A1U7ZE11_NELNU; NAC domain-containing protein 8
STRINGXP_010251054.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.14e-97NAC domain containing protein 44