PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_002719-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | TCP | ||||||||
Protein Properties | Length: 146aa MW: 16075.3 Da PI: 10.3978 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 89.6 | 6.7e-28 | 4 | 74 | 3 | 73 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 ++ ++++ hTkv+gR+ R+ +sa+ ar+F+L++eLG+++d++ti WLl+ +p i+ +tgts+ + ++ NNU_002719-RA 4 RRRASTKDWHTKVEGRGHRIWMSATYTARIFQLTRELGHKSDGETIRWLLKHTEPTIIPATGTSTVPTIAM 74 58999**********************************************************77666333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 2.3E-21 | 8 | 92 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 18.91 | 9 | 63 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
MVTRRRASTK DWHTKVEGRG HRIWMSATYT ARIFQLTREL GHKSDGETIR WLLKHTEPTI 60 IPATGTSTVP TIAMSVGGIL KSPTTSLASD GDMTKKNRKR SVSSEYYDIS DGVSISSGLA 120 PIGAIAVPQQ LLRHYPITPP SDGWVE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010255575.1 | 9e-62 | PREDICTED: transcription factor TCP9 | ||||
Swissprot | O64647 | 5e-51 | TCP9_ARATH; Transcription factor TCP9 | ||||
TrEMBL | A0A1U7ZTX9 | 2e-60 | A0A1U7ZTX9_NELNU; transcription factor TCP9 | ||||
STRING | XP_010255575.1 | 3e-61 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 2e-53 | TCP family protein |