PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_002613-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 308aa MW: 34060.2 Da PI: 7.9861

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_002613-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.5	5e-07	180	232	9	62
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +++k R + +rsR RK+++i+eLe+ v L+ ++L+ ++ +l + a l +e NNU_002613-RA 180 KAAK-RHSGQRSRVRKLQYIAELERTVNLLQCLESDLAARVGSLLQRHAILSME 232 5555.8999*****************************9999998777766666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	1.19E-14	182	227	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.5E-5	184	227	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence Send to blast
MSRQAHLPPR CPPQNRASSC STQGTVSQTL QGNGELYLHH HRFHSQSSIL EEQPSWLDDL 60 LGDSDTNLKG IIHRRSASDS LTLLEAPASL NLTSNADIKN TISDETGTGM EAACIYGPNS 120 PRCRSNLTHS KDSIVSALSE YVPQTPLQHS SKNLCIPETA QSYLEGGACG LNNELHSETK 180 AAKRHSGQRS RVRKLQYIAE LERTVNLLQC LESDLAARVG SLLQRHAILS MENTTLEQKI 240 AILQKEKLIM DGQYQTLRKE VERLKVCYIN HLKSKTTVCR RTGSAIDAII SDSSWQMLDI 300 GKLSLGXN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010247053.1	0.0	PREDICTED: uncharacterized protein At4g06598 isoform X1
Refseq	XP_010247059.1	0.0	PREDICTED: uncharacterized protein At4g06598 isoform X1
Refseq	XP_010247067.1	0.0	PREDICTED: uncharacterized protein At4g06598 isoform X1
Refseq	XP_010247076.1	0.0	PREDICTED: uncharacterized protein At4g06598 isoform X1
Refseq	XP_010247083.1	0.0	PREDICTED: uncharacterized protein At4g06598 isoform X1
TrEMBL	A0A1U7ZHF9	0.0	A0A1U7ZHF9_NELNU; uncharacterized protein At4g06598 isoform X1
STRING	XP_010247048.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	7e-28	bZIP family protein