PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_002554-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 378aa    MW: 42588.2 Da    PI: 7.2706
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_002554-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.92e-4981341128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    l pGfrF Ptdeel+++yLk+k+ g + ++ +vi+ev  +++ePwdLp k++ ++++ew+fF++r +ky++g++++rat++gyWkatgk+++v+s 
  NNU_002554-RA   8 LFPGFRFCPTDEELISYYLKQKILGMEKSV-QVIPEVVFCQHEPWDLPaKSIIQSDHEWFFFAPRGRKYPNGSQTKRATEAGYWKATGKERPVKS- 101
                    579************************999.99***************667777899**************************************. PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +++l+g k+tLvf+kgrap+ge+tdW+mhey++
  NNU_002554-RA 102 GSNLIGAKRTLVFHKGRAPEGERTDWIMHEYSI 134
                    9******************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.18E-553150IPR003441NAC domain
PROSITE profilePS5100553.6258150IPR003441NAC domain
PfamPF023659.7E-2610134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009626Biological Processplant-type hypersensitive response
GO:0009910Biological Processnegative regulation of flower development
GO:0034976Biological Processresponse to endoplasmic reticulum stress
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MSMTDLSLFP GFRFCPTDEE LISYYLKQKI LGMEKSVQVI PEVVFCQHEP WDLPAKSIIQ  60
SDHEWFFFAP RGRKYPNGSQ TKRATEAGYW KATGKERPVK SGSNLIGAKR TLVFHKGRAP  120
EGERTDWIMH EYSIKGNFQD SFVVCRLRKK PSSSPTTPNC ISVSQKGLSP PSVNAYAVGE  180
RNQPQVGTSE AGKETECSSE KHRSSSQCSS SEQVDSASDL PEETCSLQPH THTSEKNHDV  240
DDDCFADILK EDIIQLDIPS TSSAELPLPT VVDKSVSERN YGQSIYTAKM QEFPFQGTAQ  300
RRIRLRRFKR SPCDADSLEA CDDHHVAAVM RLDVKQSVNG ARDTLLVRAV NYRLILWFFP  360
ILVLLVLLLL LPRGTDHF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-44315412169NO APICAL MERISTEM PROTEIN
1ut4_B5e-44315412169NO APICAL MERISTEM PROTEIN
1ut7_A5e-44315412169NO APICAL MERISTEM PROTEIN
1ut7_B5e-44315412169NO APICAL MERISTEM PROTEIN
3swm_A6e-44315415172NAC domain-containing protein 19
3swm_B6e-44315415172NAC domain-containing protein 19
3swm_C6e-44315415172NAC domain-containing protein 19
3swm_D6e-44315415172NAC domain-containing protein 19
3swp_A6e-44315415172NAC domain-containing protein 19
3swp_B6e-44315415172NAC domain-containing protein 19
3swp_C6e-44315415172NAC domain-containing protein 19
3swp_D6e-44315415172NAC domain-containing protein 19
4dul_A5e-44315412169NAC domain-containing protein 19
4dul_B5e-44315412169NAC domain-containing protein 19
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010246215.20.0PREDICTED: NAC domain-containing protein 89-like isoform X2
TrEMBLA0A1U7ZE090.0A0A1U7ZE09_NELNU; NAC domain-containing protein 89-like isoform X2
STRINGXP_010246205.11e-157(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.13e-78NAC domain containing protein 89