PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_002063-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 302aa MW: 34638.2 Da PI: 6.7775 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.7 | 2.1e-31 | 14 | 162 | 1 | 127 |
NAM 1 lppGfrF..hPtdeelvveyLkkkvegkklelee.................vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatg 71 lppGfrF hPt+e+l+++yL++k +++ + + vi+e+d+yk++P dLp +++ +k+wy F++++ + NNU_002063-RA 14 LPPGFRFhfHPTEEQLLCYYLNNKNNQDIDNYRNlsvpctsitdvsllgfsVIQEIDLYKYDPYDLPGiacfpfGIRGCKKHWYCFTEKAIS---- 105 6999985337**************9988844434566777788899999989**************95578887667778899999988664.... PP NAM 72 krknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +r++r+t+sg+Wk g+ ++++ +g l g ++ +vfy+g++p+++ktdW+m ey+ NNU_002063-RA 106 ERAKRKTRSGFWKRRGQARDIVGGkDGVLLGRRRAFVFYRGNSPRATKTDWIMYEYT 162 599******************98757788***************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.54E-35 | 11 | 179 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-19 | 15 | 162 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 35.08 | 16 | 179 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence Send to blast |
MADPNYFKWI PTQLPPGFRF HFHPTEEQLL CYYLNNKNNQ DIDNYRNLSV PCTSITDVSL 60 LGFSVIQEID LYKYDPYDLP GIACFPFGIR GCKKHWYCFT EKAISERAKR KTRSGFWKRR 120 GQARDIVGGK DGVLLGRRRA FVFYRGNSPR ATKTDWIMYE YTPVDRLKDS FVLCRIFLRS 180 HSGNIISEHI QSCYAEKNVP QMHDAGISVP FTQNDADLVS GVCEVPLHED RHIDIHNEIQ 240 GSPMNLISKP DCPIVAQQVT DGYQFPVVVP QHNEHELSPE LELHKFDCSM QLAAAGTSET 300 ES |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 6e-23 | 14 | 184 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-23 | 14 | 184 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-23 | 14 | 184 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-23 | 14 | 184 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
3swm_B | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
3swm_C | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
3swm_D | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
3swp_A | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
3swp_B | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
3swp_C | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
3swp_D | 7e-23 | 14 | 184 | 20 | 173 | NAC domain-containing protein 19 |
4dul_A | 6e-23 | 14 | 184 | 17 | 170 | NAC domain-containing protein 19 |
4dul_B | 6e-23 | 14 | 184 | 17 | 170 | NAC domain-containing protein 19 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010270253.1 | 0.0 | PREDICTED: NAC domain-containing protein 21/22-like | ||||
TrEMBL | A0A1U8ARB7 | 0.0 | A0A1U8ARB7_NELNU; NAC domain-containing protein 21/22-like | ||||
STRING | XP_010270253.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 5e-29 | NAC domain containing protein 58 |