PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_001801-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | Trihelix | ||||||||
Protein Properties | Length: 254aa MW: 29291.9 Da PI: 9.9249 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 40 | 1e-12 | 28 | 117 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W+++ + +Li+a +++ +l+rg+l ++W+ev +++ + ++ +r+ +qCk++++ l+k+yk +k + + +s+++++ l NNU_001801-RA 28 CWSEEATYTLIKAWSDRYIELNRGNLHRKDWQEVTNAVnvrhgAIKKNRRTDVQCKNRIDTLKKKYKIEKGRILASDEXLTSSWSFYYCL 117 7*************************************987765566689*****************99988777777778899998665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.3E-21 | 26 | 118 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MDQNSPQRFS HGIRATPSHN PLPFYEDCWS EEATYTLIKA WSDRYIELNR GNLHRKDWQE 60 VTNAVNVRHG AIKKNRRTDV QCKNRIDTLK KKYKIEKGRI LASDEXLTSS WSFYYCLDPL 120 IGSTVPVKKP SPPLALPLLY RKTPPSRPHA SLISVAVRST KEKRPSPAVD DSFFRRNYSV 180 VAAAAVATEN DTDSEPSRSI TESRRRDGEA DGFRQLAQAI TRFEEIYERV EGAKQRQMIE 240 LEKQRIIKDC RVSY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019054876.1 | 0.0 | PREDICTED: trihelix transcription factor ASIL1-like | ||||
Swissprot | Q9LJG8 | 5e-27 | ASIL2_ARATH; Trihelix transcription factor ASIL2 | ||||
TrEMBL | A0A1U8Q9Y3 | 0.0 | A0A1U8Q9Y3_NELNU; trihelix transcription factor ASIL1-like | ||||
STRING | XP_010273923.1 | 1e-178 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 7e-48 | sequence-specific DNA binding transcription factors |