PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf38945g00001.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 296aa MW: 33821.4 Da PI: 5.2881

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf38945g00001.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.3	2.5e-11	166	210	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L ++ Niben101Scf38945g00001.1 166 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRV 210 899*********************************988776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.6E-13	162	226	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.576	164	216	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.6E-13	166	217	No hit	No description
SuperFamily	SSF57959	9.85E-12	166	220	No hit	No description
Pfam	PF00170	9.0E-10	166	210	IPR004827	Basic-leucine zipper domain
CDD	cd14703	8.81E-22	167	217	No hit	No description
PROSITE pattern	PS00036	0	169	184	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence Send to blast
MTPNWPDFSH HQKIDITTTT AIHNPSWVDE FLDFSSTKRG SHRRSISDSI AFLEAPMVEE 60 CRRLSTPGKT TGSEFERFDD EQLMSMFNDD IANPSSPSDN NSINEEKKMS TIISTDDQVT 120 QQQQQQQQLK TEPEEVESSC KSDEQTASDQ HATADNNSSG KIVDPKRIKR ILANRQSAQR 180 SRVRKLQYIS ELERSVTTLQ AEVSVLSPRV AFLDHQRLVL NVDNSVLKQR IAALAQDKIF 240 KDAHQEALKR EIERLRQIYY QQNLKKMEDE IPTPQSKSQP TAADANASEE KEQLFN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009777081.1	0.0	PREDICTED: basic leucine zipper 61-like
Refseq	XP_016468123.1	0.0	PREDICTED: basic leucine zipper 61-like
Swissprot	Q9M2K4	1e-105	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A1S3ZUX9	0.0	A0A1S3ZUX9_TOBAC; basic leucine zipper 61-like
TrEMBL	A0A1U7WIJ0	0.0	A0A1U7WIJ0_NICSY; basic leucine zipper 61-like
STRING	XP_009777081.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1775	24	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	8e-94	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]