PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf36703g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 19679.3 Da PI: 4.6367 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.9 | 3.8e-11 | 135 | 179 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 y+GVr+++ g+W AeIr p + r +r++ g+f+ +Aa a++ a+ Niben101Scf36703g00001.1 135 YRGVRQHP-FGKWTAEIRGP---N-RaARIWHGTFDNSHDAAVAYDDAAY 179 9*******.9*******998...3.47********************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 7.59E-13 | 134 | 168 | No hit | No description |
Pfam | PF00847 | 3.3E-7 | 134 | 179 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-13 | 134 | 179 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 17.846 | 134 | 180 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.4E-9 | 134 | 180 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.1E-19 | 134 | 179 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.9E-7 | 135 | 146 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.9E-7 | 157 | 173 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MLTKDKQSEE VGRGGEISES DIAEMVSTPN NSFNNSSTGV VFSSNSNSNS LFNITNSDFI 60 STPTSSPHPD WNFLSFDDST RLTALLNDGP ENVSCTYKGV DFISTPTSDS NLSLDVTTSL 120 TTLSNSAPEN ARRIYRGVRQ HPFGKWTAEI RGPNRAARIW HGTFDNSHDA AVAYDDAAYR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019261384.1 | 7e-96 | PREDICTED: probable WRKY transcription factor 41 isoform X1 | ||||
Refseq | XP_019261385.1 | 7e-96 | PREDICTED: probable WRKY transcription factor 41 isoform X1 | ||||
Refseq | XP_019261387.1 | 3e-96 | PREDICTED: probable WRKY transcription factor 41 isoform X3 | ||||
TrEMBL | A0A314LAA1 | 2e-94 | A0A314LAA1_NICAT; Putative wrky transcription factor 41 | ||||
STRING | XP_009793242.1 | 1e-94 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 4e-13 | ethylene response factor 110 |