PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf16613g03001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 170aa MW: 19734.7 Da PI: 8.8727 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.1 | 2.8e-09 | 18 | 57 | 10 | 50 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50 + eel +yL++k++g++++ i+++d+ykvePwdLp+ Niben101Scf16613g03001.1 18 RREELGRYYLRRKITGRPIKS-APISDIDLYKVEPWDLPEY 57 5699**************999.78**************942 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.53E-9 | 19 | 58 | IPR003441 | NAC domain |
Pfam | PF12174 | 7.9E-9 | 66 | 101 | IPR022003 | RST domain of plant C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MESRGSLESL AAGSDFTRRE ELGRYYLRRK ITGRPIKSAP ISDIDLYKVE PWDLPEYQRN 60 GVPAKNPNSP WISFPALISA LSKFLLPHTI KLITKYHCDH KMLWERLITL LQLSTTSSPD 120 MEKEYRCRRF ENRRVESCFF HLSYVALTWQ FMYCVDNMGD AFGNGGGMTI |