PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf12841g03023.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 316aa    MW: 33928.9 Da    PI: 9.2483
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf12841g03023.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822205.41.6e-6321441149
                    DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 
                               ++++r+ptwkErEnnkrRERrRRaiaaki+ GLR++Gny+lpk++DnneVlkALc++AGw+ve+DGttyrkg+kp+e+ + +g s
  Niben101Scf12841g03023.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFGGLRMYGNYQLPKHCDNNEVLKALCNQAGWTVEPDGTTYRKGCKPMERLDFIGGS 86 
                               5899********************************************************************************* PP

                    DUF822  86 asaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                               +s+sp+ss+q        +sp +s ++sp+sss  sp+s++ +++++   +sl+p+l++ls+ sss
  Niben101Scf12841g03023.1  87 TSISPCSSYQ--------PSPFTSNNPSPASSSLHSPASSSYATNQNMdgKSLIPWLRNLSSGSSS 144
                               **********........9999999999999988777666555554444599********996665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.5E-643139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FGGLRMYGNY QLPKHCDNNE VLKALCNQAG  60
WTVEPDGTTY RKGCKPMERL DFIGGSTSIS PCSSYQPSPF TSNNPSPASS SLHSPASSSY  120
ATNQNMDGKS LIPWLRNLSS GSSSASSSKL PHFHIHTGSI SAPVTPPFSS PTARTPRLKT  180
DAGWAGFRYP FLPSSTPASP VRQTFTGSEW LTGISGPPSP TYSLVSSNPF GFKMDGLALS  240
HGGSRKCTPG QSGTCSPAIT AGLDNTADIP MAEVISDEFA FGSNAGGMVK PWEGERIHED  300
CGPDDLELTL GSSKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768995.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
RefseqXP_016472541.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-122BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1S4A7I30.0A0A1S4A7I3_TOBAC; BES1/BZR1 homolog protein 4-like
TrEMBLA0A1U7W4060.0A0A1U7W406_NICSY; BES1/BZR1 homolog protein 4-like
STRINGXP_009768995.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-109BES1/BZR1 homolog 4