PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf10887g01009.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 182aa MW: 20790.5 Da PI: 8.3632

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf10887g01009.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	131.5	9.5e-41	35	126	4	95
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasa 88 r p+ +Er +nk+RE +RRaia ki+aGLRa+Gnyklpk+aD n+ lkALc eAGw ve+DGt yrk ++p + + + sa Niben101Scf10887g01009.1 35 FRYPSDRERQKNKQREQKRRAIAHKIFAGLRAHGNYKLPKHADTNDLLKALCDEAGWRVEEDGTIYRKEKNPVKDMPKLVDVDSA 119 5899*********************************************************************776666655555 PP DUF822 89 spesslq 95 +++ + q Niben101Scf10887g01009.1 120 QVTMEDQ 126 5544444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.2E-37	36	126	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence Send to blast
MVEERRNVLR GCIKTSRGPW LVHKTTKDGS VVTRFRYPSD RERQKNKQRE QKRRAIAHKI 60 FAGLRAHGNY KLPKHADTND LLKALCDEAG WRVEEDGTIY RKEKNPVKDM PKLVDVDSAQ 120 VTMEDQIKDS NYCKCEDQIK DGDYCKCDVD MNVAEIETSQ PGGSLTPFAD AFNINLNLSL 180 SS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-16	36	107	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009797386.1	1e-122	PREDICTED: protein BRASSINAZOLE-RESISTANT 2-like
TrEMBL	A0A1U7Y5Z4	1e-121	A0A1U7Y5Z4_NICSY; protein BRASSINAZOLE-RESISTANT 2-like
STRING	XP_009797386.1	1e-122	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6204	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50750.1	8e-21	BES1/BZR1 homolog 1