PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf10438g00009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21710.7 Da PI: 5.1632 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.5 | 9e-10 | 12 | 37 | 30 | 55 |
AP2 30 rfslgkfgtaeeAakaaiaarkkleg 55 ++lg+f+tae+Aa+a+++a++k++g Niben101Scf10438g00009.1 12 MVWLGTFDTAEDAARAYDEAALKFRG 37 58**********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 13.841 | 1 | 45 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.11E-19 | 1 | 47 | No hit | No description |
SMART | SM00380 | 1.1E-10 | 6 | 51 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.3E-5 | 10 | 37 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-17 | 10 | 46 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-12 | 11 | 47 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MIDDDETNIR TMVWLGTFDT AEDAARAYDE AALKFRGSKA KLNFPENIKL LPTSSTHEQS 60 PLKLYPHQNI VGNLGLPTST FPTDFVENTR VSYFSNDYPI IHTQPNYYNN TNISPQIFLN 120 DDFQRLRPPS SLLNQFQNSS SSSSSSLSSS SSSSQLPFLP RMFFQGSQPT QSSGNDFRAT 180 LSDSTYDHPS SSSR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009767382.1 | 3e-96 | PREDICTED: ethylene-responsive transcription factor ERF113-like | ||||
Refseq | XP_016473785.1 | 3e-96 | PREDICTED: ethylene-responsive transcription factor ERF113-like | ||||
TrEMBL | A0A1S4AAU4 | 6e-95 | A0A1S4AAU4_TOBAC; ethylene-responsive transcription factor ERF113-like | ||||
TrEMBL | A0A1U7VH14 | 6e-95 | A0A1U7VH14_NICSY; ethylene-responsive transcription factor ERF113-like | ||||
STRING | XP_009767382.1 | 1e-95 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64750.1 | 1e-10 | ERF family protein |