PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf09659g03018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24531 Da PI: 4.6382 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.2 | 2e-08 | 2 | 25 | 32 | 55 |
AP2 32 slgkfgtaeeAakaaiaarkkleg 55 +lg+f+taeeAa+a+++a+ l+g Niben101Scf09659g03018.1 2 WLGTFDTAEEAAQAYDEAACLLRG 25 9******************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 5.8E-6 | 1 | 39 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.55E-9 | 1 | 33 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.03E-15 | 1 | 32 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 5.8E-14 | 1 | 34 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 11.97 | 1 | 33 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.4E-4 | 2 | 25 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MWLGTFDTAE EAAQAYDEAA CLLRGSNTRM NFHNHSPANS ALSMKIRNLL NQKRSLTNIK 60 SKTTPKNHTT STTISSCTSP LSVSNSFSFN TDTSGSRSHQ ETQIFGDAYK PDLSNFMAGF 120 DQMGSSNFDH SSTFSTDFDR ILLDEEVGNF QVSKGGVDNE IGNVEDQIPE FEHMKVQRQI 180 SASLYAMNGV NEYWENIHDC NIDAAFWDLP MLYQMFCPS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009804161.1 | 1e-130 | PREDICTED: ethylene-responsive transcription factor RAP2-11-like | ||||
TrEMBL | A0A1U7YQB5 | 1e-129 | A0A1U7YQB5_NICSY; ethylene-responsive transcription factor RAP2-11-like | ||||
STRING | XP_009804161.1 | 1e-129 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2018 | 22 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 4e-14 | related to AP2 11 |